Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571Q17LZ2    866   BOP1_AEDAE Ribosome biogenesis protein BOP1 h...540.001     44.7     37     61GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
572Q7TNG5    649   EMAL2_MOUSE Echinoderm microtubule-associated...882.7     33.5     33     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.
573B4KQU8    792   BOP1_DROMO Ribosome biogenesis protein BOP1 h...630.001     44.7     33     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
574A4HUV2    808   BOP1_LEIIN Ribosome biogenesis protein BOP1 h...540.001     44.7     33     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
575B0X2V9    670   WDR48_CULQU WD repeat-containing protein 48 h...1550.024     40     21     43
576B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...970.29     36.6     26     49
577Q4QH39    808   BOP1_LEIMA Ribosome biogenesis protein BOP1 h...540.001     44.3     33     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
578Q8SQS4    556   TAF5_ENCCU Transcription initiation factor TF...1820.27     37     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
579B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...970.29     36.6     26     49
580Q0CY32    673   SCONB_ASPTN Probable E3 ubiquitin ligase comp...830.041     39.7     27     51
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
581Q0U2T3    681   MDV1_PHANO Mitochondrial division protein 1 O...2081.8     34.3     23     38GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
582B4J9K1    786   BOP1_DROGR Ribosome biogenesis protein BOP1 h...630.001     44.3     33     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
583O88485    628   DC1I1_MOUSE Cytoplasmic dynein 1 intermediate...1920.001     44.3     24     42GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000922; C:spindle pole; ISS:UniProtKB.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0008017; F:microtubule binding; ISS:HGNC.::GO:0003777; F:microtubule motor activity; ISS:HGNC.
GO:0047496; P:vesicle transport along microtubule; ISS:HGNC.
584O88487    612   DC1I2_MOUSE Cytoplasmic dynein 1 intermediate...1920.001     44.3     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
585Q09731    962   BU107_SCHPO UBP9-binding protein bun107 OS=Sc...2370.001     44.3     22     40GO:0051285; C:cell cortex of cell tip; IDA:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0030428; C:cell septum; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:2000158; P:positive regulation of ubiquitin-specific protease activity; IMP:PomBase.
586Q7ZW33    517   UTP15_DANRE U3 small nucleolar RNA-associated...1040.001     43.9     29     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
587Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...861.6     34.3     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
588C6HTE8    456   LIS1_AJECH Nuclear distribution protein PAC1 ...1090.8     35     29     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
589C0NRC6    456   LIS1_AJECG Nuclear distribution protein PAC1 ...1090.8     35     29     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
590A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...463.5     33.1     26     59GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
591Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...3420.001     43.5     21     39
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
592P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...2280.005     42     25     40
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
593Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...784.9     32.7     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
594Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...759.6     32     29     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
595A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...1980.009     41.6     25     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
596Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...840.011     41.2     30     46GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
597Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...820.11     38.1     22     45GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
598A7EZJ5    452   CIAO1_SCLS1 Probable cytosolic iron-sulfur pr...2480.002     43.5     22     35
599C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...722.8     33.5     35     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
600Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...790.64     35.8     32     48GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
601Q6H8D5    910   COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza...790.67     35.8     32     48GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 571 - 600
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::