Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR142C
Length:
199
Number of sequences:
5887
Description:
YMR142C RPL13B SGDID:S000004750, Chr XIII from 550801-550206,551207-551204, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31C3MKC0    79   RL13E_SULIL 50S ribosomal protein L13e OS=Sul...540.00007     43.5     41     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
32C3N968    79   RL13E_SULIY 50S ribosomal protein L13e OS=Sul...540.00007     43.5     41     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
33C3MU90    79   RL13E_SULIM 50S ribosomal protein L13e OS=Sul...540.00007     43.5     41     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
34C4KKE5    79   RL13E_SULIK 50S ribosomal protein L13e OS=Sul...540.00007     43.5     41     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
35C3N178    79   RL13E_SULIA 50S ribosomal protein L13e OS=Sul...540.00007     43.5     41     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
36P58469    77   RL13E_SULTO 50S ribosomal protein L13e OS=Sul...740.003     38.9     24     57GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
37Q1Q974    318   ISPH_PSYCK 4-hydroxy-3-methylbut-2-enyl dipho...1262.8     32     24     40
GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro.
38Q4FQY8    318   ISPH_PSYA2 4-hydroxy-3-methylbut-2-enyl dipho...1264.3     31.6     24     40
GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro.
records
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