Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR137C
Length:
661
Number of sequences:
5887
Description:
YMR137C PSO2 SGDID:S000004745, Chr XIII from 544963-542978, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclease required for a post-incision step in the repair of DNA single and double-strand breaks that result from interstrand crosslinks produced by a variety of mono- and bi-functional psoralen derivatives; induced by UV-irradiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P30620    661   PSO2_YEAST DNA cross-link repair protein PSO2...6610     1373     100     100GO:0005634; C:nucleus; IC:SGD.
GO:0008409; F:5'-3' exonuclease activity; IDA:SGD.::GO:0003684; F:damaged DNA binding; IMP:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006302; P:double-strand break repair; TAS:SGD.
2Q10264    560   PSO2_SCHPO DNA cross-link repair protein pso2...5428e-50     187     29     46GO:0005634; C:nucleus; IDA:PomBase.
GO:0008409; F:5'-3' exonuclease activity; ISS:PomBase.::GO:0003684; F:damaged DNA binding; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IMP:PomBase.
3Q9JIC3    1026   DCR1A_MOUSE DNA cross-link repair 1A protein ...4521e-46     181     30     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
4Q5QJC4    972   DCR1A_CHICK DNA cross-link repair 1A protein ...4545e-45     176     30     46GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0016787; F:hydrolase activity; IEA:InterPro.
GO:0000715; P:nucleotide-excision repair, DNA damage recognition; TAS:Reactome.
5Q6PJP8    1040   DCR1A_HUMAN DNA cross-link repair 1A protein ...4447e-45     176     31     45GO:0005730; C:nucleolus; IDA:HPA.
GO:0016787; F:hydrolase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
6Q38961    484   SNM1_ARATH DNA cross-link repair protein SNM1...4782e-36     146     29     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IMP:TAIR.
7Q86KS1    920   DCR1_DICDI DNA cross-link repair 1 protein OS...4531e-33     141     29     45GO:0005634; C:nucleus; IC:dictyBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:dictyBase.
GO:0006289; P:nucleotide-excision repair; ISS:dictyBase.
8Q5QJC3    457   DCR1B_CHICK 5' exonuclease Apollo OS=Gallus g...324     34.3     50     69GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031848; P:protection from non-homologous end joining at telomere; ISS:UniProtKB.::GO:0031860; P:telomeric 3' overhang formation; ISS:UniProtKB.::GO:0031627; P:telomeric loop formation; ISS:UniProtKB.
9D2H8V8    529   DCR1B_AILME 5' exonuclease Apollo OS=Ailuropo...2554e-21     100     25     44GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031848; P:protection from non-homologous end joining at telomere; ISS:UniProtKB.::GO:0031860; P:telomeric 3' overhang formation; ISS:UniProtKB.::GO:0031627; P:telomeric loop formation; ISS:UniProtKB.
10Q9H816    532   DCR1B_HUMAN 5' exonuclease Apollo OS=Homo sap...2554e-20     97.8     26     43GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0000781; C:chromosome, telomeric region; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000075; P:cell cycle checkpoint; IMP:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031848; P:protection from non-homologous end joining at telomere; IMP:UniProtKB.::GO:0031860; P:telomeric 3' overhang formation; ISS:UniProtKB.::GO:0031627; P:telomeric loop formation; ISS:UniProtKB.
11Q4KLY6    541   DCR1B_RAT 5' exonuclease Apollo OS=Rattus nor...312.7     34.7     39     74GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031848; P:protection from non-homologous end joining at telomere; ISS:UniProtKB.::GO:0031860; P:telomeric 3' overhang formation; ISS:UniProtKB.::GO:0031627; P:telomeric loop formation; ISS:UniProtKB.
12Q8C7W7    541   DCR1B_MOUSE 5' exonuclease Apollo OS=Mus musc...321.7     35.4     41     72GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0000781; C:chromosome, telomeric region; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; IMP:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031848; P:protection from non-homologous end joining at telomere; IMP:UniProtKB.::GO:0031860; P:telomeric 3' overhang formation; IMP:UniProtKB.::GO:0031627; P:telomeric loop formation; IMP:UniProtKB.
13B0V2S2    571   DCR1B_DANRE 5' exonuclease Apollo OS=Danio re...2397e-17     87.8     28     43GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031848; P:protection from non-homologous end joining at telomere; ISS:UniProtKB.::GO:0031860; P:telomeric 3' overhang formation; ISS:UniProtKB.::GO:0031627; P:telomeric loop formation; ISS:UniProtKB.
14Q5QJC2    714   DCR1C_CHICK Protein artemis OS=Gallus gallus ...2500.00000000001     71.6     27     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
15Q5XIX3    698   DCR1C_RAT Protein artemis OS=Rattus norvegicu...1800.0000000004     66.6     31     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
16Q8K4J0    705   DCR1C_MOUSE Protein artemis OS=Mus musculus (...1590.000000008     62.4     31     47GO:0005634; C:nucleus; IC:MGI.
GO:0030183; P:B cell differentiation; IMP:MGI.::GO:0006310; P:DNA recombination; IMP:MGI.::GO:0006302; P:double-strand break repair; IMP:MGI.::GO:0010212; P:response to ionizing radiation; IMP:MGI.::GO:0000723; P:telomere maintenance; IMP:MGI.
17Q96SD1    692   DCR1C_HUMAN Protein artemis OS=Homo sapiens (...1690.00000001     62     30     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008409; F:5'-3' exonuclease activity; IDA:MGI.::GO:0000014; F:single-stranded DNA specific endodeoxyribonuclease activity; IDA:MGI.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
18Q5R6Z9    692   DCR1C_PONAB Protein artemis OS=Pongo abelii (...1590.00000002     61.2     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
19Q5RGE5    639   DCR1C_DANRE Protein artemis OS=Danio rerio (Z...1690.00000003     60.8     29     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
20Q55470    554   Y514_SYNY3 Uncharacterized protein sll0514 OS...1250.21     38.5     26     50
GO:0016787; F:hydrolase activity; IEA:InterPro.
21B1ZZL9    1017   DNLI_OPITP Probable DNA ligase OS=Opitutus te...1810.63     37     24     37
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
22Q6LM29    311   MIAA_PHOPR tRNA dimethylallyltransferase OS=P...1100.73     36.2     25     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0052381; F:tRNA dimethylallyltransferase activity; IEA:EC.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
23P17454    482   LBP_RABIT Lipopolysaccharide-binding protein ...942.5     35     27     44GO:0005615; C:extracellular space; IDA:BHF-UCL.
GO:0051636; F:Gram-negative bacterial cell surface binding; IDA:BHF-UCL.::GO:0008289; F:lipid binding; IEA:InterPro.::GO:0001530; F:lipopolysaccharide binding; IDA:BHF-UCL.::GO:0005102; F:receptor binding; IDA:BHF-UCL.
GO:0006953; P:acute-phase response; IDA:BHF-UCL.::GO:0006968; P:cellular defense response; IDA:BHF-UCL.::GO:0050829; P:defense response to Gram-negative bacterium; IDA:BHF-UCL.::GO:0045087; P:innate immune response; IDA:BHF-UCL.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW.::GO:0002281; P:macrophage activation involved in immune response; IDA:BHF-UCL.::GO:0008228; P:opsonization; IDA:BHF-UCL.::GO:0032760; P:positive regulation of tumor necrosis factor production; IDA:BHF-UCL.
24Q8ZD92    343   CPDP_YERPE Probable 3',5'-cyclic-nucleotide p...1124.4     33.9     29     44GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
GO:0004115; F:3',5'-cyclic-AMP phosphodiesterase activity; IEA:InterPro.
GO:0006198; P:cAMP catabolic process; IEA:InterPro.
25D4N502    360   DIOX3_PAPSO Codeine O-demethylase OS=Papaver ...506.7     33.5     40     58
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0009820; P:alkaloid metabolic process; IEA:UniProtKB-KW.
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