Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...1126.4     32.7     26     44GO:0005737; C:cytoplasm; ISS:UniProtKB.
962Q803X4    445   DCA13_DANRE DDB1- and CUL4-associated factor ...1846.5     33.1     22     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
963O94518    544   DIC1_SCHPO Dynein intermediate chain 1 OS=Sch...896.6     33.1     24     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0030286; C:dynein complex; TAS:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0030989; P:dynein-driven meiotic oscillatory nuclear movement; IMP:PomBase.
964Q9LRZ0    1131   TPR2_ARATH Topless-related protein 2 OS=Arabi...396.6     33.1     33     72GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
965Q4WX90    340   EIF3I_ASPFU Eukaryotic translation initiation...387     32.7     39     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
966B0XYC8    340   EIF3I_ASPFC Eukaryotic translation initiation...387     32.7     39     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
967A1D7I5    340   EIF3I_NEOFI Eukaryotic translation initiation...387.1     32.7     39     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
968C5DUI6    397   ASA1_ZYGRC ASTRA-associated protein 1 OS=NCYC...1467.1     32.7     21     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
969B0BNA7    325   EIF3I_RAT Eukaryotic translation initiation f...1428.4     32.3     22     41GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
970B6HP56    458   LIS11_PENCW Nuclear distribution protein nudF...517.2     32.7     31     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
971Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...1997.3     32.7     23     41
972O13286    556   SRW1_SCHPO WD repeat-containing protein srw1 ...1537.3     33.1     22     39GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0030996; P:cell cycle arrest in response to nitrogen starvation; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IC:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.
973P90587    601   WD66_PHYPO 66 kDa stress protein OS=Physarum ...1037.4     33.1     28     40
974A8PZI1    419   JIP5_MALGO WD repeat-containing protein JIP5 ...447.4     32.7     41     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
975A9UZS7    799   BOP1_MONBE Ribosome biogenesis protein BOP1 h...407.5     33.1     38     65GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
976Q5XIG8    350   STRAP_RAT Serine-threonine kinase receptor-as...707.6     32.7     30     51GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
977Q291L9    411   LIS1_DROPS Lissencephaly-1 homolog OS=Drosoph...1347.7     32.7     25     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
978B4GAJ1    411   LIS1_DROPE Lissencephaly-1 homolog OS=Drosoph...1347.7     32.7     25     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
979Q5R1S9    566   CAF1B_CHICK Chromatin assembly factor 1 subun...1347.7     32.7     26     41GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
980P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...367.9     33.1     39     56GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
981Q86HX1    1114   HIRA_DICDI Protein HIRA OS=Dictyostelium disc...1358     33.1     21     42GO:0005634; C:nucleus; ISS:dictyBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; ISS:dictyBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
982Q75BS7    513   YD156_ASHGO WD repeat-containing protein ACR1...818     32.7     25     43
983Q9Z1Z2    350   STRAP_MOUSE Serine-threonine kinase receptor-...708.1     32.7     30     51GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005102; F:receptor binding; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; IDA:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
984Q9Y3F4    350   STRAP_HUMAN Serine-threonine kinase receptor-...708.1     32.7     30     51GO:0030054; C:cell junction; IDA:HPA.::GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
985Q4WLM7    467   LIS1_ASPFU Nuclear distribution protein nudF ...318.2     32.7     42     71GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
986B0XM00    467   LIS1_ASPFC Nuclear distribution protein nudF ...318.2     32.7     42     71GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
987Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...878.3     32.7     30     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
988B3N4C7    326   EIF3I_DROER Eukaryotic translation initiation...1268.5     32.3     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
989Q63100    643   DC1I1_RAT Cytoplasmic dynein 1 intermediate c...1958.6     32.7     23     41GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IDA:HGNC.::GO:0000922; C:spindle pole; ISS:UniProtKB.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0008017; F:microtubule binding; IDA:HGNC.::GO:0003777; F:microtubule motor activity; IDA:HGNC.
GO:0047496; P:vesicle transport along microtubule; IDA:HGNC.
990Q756D0    445   YTM1_ASHGO Ribosome biogenesis protein YTM1 O...1798.7     32.7     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
991Q68EI0    431   WDR18_DANRE WD repeat-containing protein 18 O...1158.9     32.7     23     46
GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; IMP:UniProtKB.
records
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