Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
931Q5XFW8    322   SEC13_RAT Protein SEC13 homolog OS=Rattus nor...1194.8     33.1     25     49GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IDA:MGI.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
932Q9C2I5    487   YTM1_NEUCR Ribosome biogenesis protein ytm-1 ...475     33.5     34     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
933Q9D1M0    322   SEC13_MOUSE Protein SEC13 homolog OS=Mus musc...1194.9     33.1     25     49GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
934A0JP70    1848   WDR90_XENTR WD repeat-containing protein 90 O...1514.9     33.9     26     40
935Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...675     33.5     33     48
936Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...1805     33.5     21     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
937Q2H139    657   MDV1_CHAGB Mitochondrial division protein 1 O...885     33.5     23     50GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
938Q9Y2I8    494   WDR37_HUMAN WD repeat-containing protein 37 O...675     33.5     33     48
939A7ETB3    667   MDV1_SCLS1 Mitochondrial division protein 1 O...875.1     33.5     26     53GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
940O13985    512   YEG3_SCHPO Uncharacterized WD repeat-containi...1425.1     33.5     25     43GO:0033186; C:CAF-1 complex; IDA:PomBase.::GO:0016585; C:chromatin remodeling complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0006335; P:DNA replication-dependent nucleosome assembly; IC:PomBase.::GO:0070829; P:heterochromatin maintenance; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0090053; P:positive regulation of chromatin silencing at centromere; IMP:PomBase.::GO:0090055; P:positive regulation of chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:PomBase.::GO:0034504; P:protein localization to nucleus; IMP:PomBase.
941Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...675.1     33.5     33     48
942O88485    628   DC1I1_MOUSE Cytoplasmic dynein 1 intermediate...1755.2     33.5     23     41GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000922; C:spindle pole; ISS:UniProtKB.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0008017; F:microtubule binding; ISS:HGNC.::GO:0003777; F:microtubule motor activity; ISS:HGNC.
GO:0047496; P:vesicle transport along microtubule; ISS:HGNC.
943Q7K0L4    630   WDR26_DROME WD repeat-containing protein 26 h...1398.6     32.7     27     40GO:0005737; C:cytoplasm; ISS:UniProtKB.
944Q39336    327   GBLP_BRANA Guanine nucleotide-binding protein...335.3     33.1     42     67
945Q8NA75    395   DC4L2_HUMAN DDB1- and CUL4-associated factor ...735.5     33.1     32     47
946B4JB43    326   EIF3I_DROGR Eukaryotic translation initiation...2475.6     33.1     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
947Q5RE95    330   WDR5B_PONAB WD repeat-containing protein 5B O...1075.6     33.1     29     43
948Q148I1    392   PAAF1_BOVIN Proteasomal ATPase-associated fac...1095.7     33.1     25     42GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
949Q86VZ2    330   WDR5B_HUMAN WD repeat-containing protein 5B O...1075.7     33.1     29     43
950Q6CEW7    511   YTM1_YARLI Ribosome biogenesis protein YTM1 O...1105.7     33.1     26     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
951A1CUD6    467   LIS11_ASPCL Nuclear distribution protein nudF...385.7     33.1     37     63GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
952Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...405.8     33.1     40     58
GO:0051297; P:centrosome organization; IMP:FlyBase.
953Q6CU59    444   YTM1_KLULA Ribosome biogenesis protein YTM1 O...1645.9     33.1     21     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
954B2AY28    784   ERB1_PODAN Ribosome biogenesis protein ERB1 O...1215.9     33.5     28     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
955O24456    327   GBLPA_ARATH Guanine nucleotide-binding protei...336     33.1     42     67GO:0009507; C:chloroplast; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.
956O45933    363   SEH1_CAEEL Nucleoporin SEH1 OS=Caenorhabditis...1076     33.1     24     50GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
957Q4V8C4    328   WDR5B_RAT WD repeat-containing protein 5B OS=...1076     33.1     28     45
958A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...676.1     33.1     33     48
959Q6DDF0    495   WDR37_XENLA WD repeat-containing protein 37 O...676.2     33.1     33     48
960Q12206    467   WTM2_YEAST Transcriptional modulator WTM2 OS=...1496.2     33.1     27     40GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; IDA:SGD.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0034629; P:cellular protein complex localization; IMP:SGD.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006974; P:response to DNA damage stimulus; IMP:SGD.
961Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...1126.4     32.7     26     44GO:0005737; C:cytoplasm; ISS:UniProtKB.
records
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