Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q0CHM0    309   SEC13_ASPTN Protein transport protein sec13 O...1263.6     33.5     23     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
902Q24246    663   DYIN_DROME Cytoplasmic dynein 1 intermediate ...803.7     33.9     26     45GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0045503; F:dynein light chain binding; IPI:FlyBase.::GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051642; P:centrosome localization; IMP:FlyBase.::GO:0016482; P:cytoplasmic transport; IMP:FlyBase.::GO:0001754; P:eye photoreceptor cell differentiation; IGI:FlyBase.::GO:0007291; P:sperm individualization; IMP:FlyBase.::GO:0007051; P:spindle organization; IMP:FlyBase.
903Q5BIM8    397   ERCC8_BOVIN DNA excision repair protein ERCC-...1763.7     33.9     18     36GO:0005625; C:soluble fraction; ISS:UniProtKB.
GO:0032403; F:protein complex binding; ISS:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB.
904Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...1163.7     33.5     27     44GO:0005737; C:cytoplasm; ISS:UniProtKB.
905Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...1123.8     33.5     28     44GO:0005737; C:cytoplasm; ISS:UniProtKB.
906Q20636    356   GBB2_CAEEL Guanine nucleotide-binding protein...1143.8     33.5     27     42GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007212; P:dopamine receptor signaling pathway; IMP:WormBase.::GO:0007631; P:feeding behavior; IMP:WormBase.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; IMP:WormBase.::GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IGI:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.::GO:0043051; P:regulation of pharyngeal pumping; IMP:WormBase.::GO:0032094; P:response to food; IMP:WormBase.
907Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...1143.8     33.5     26     44GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
908B4MY65    409   LIS1_DROWI Lissencephaly-1 homolog OS=Drosoph...1343.9     33.9     26     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
909Q9UI46    699   DNAI1_HUMAN Dynein intermediate chain 1, axon...1303.9     33.9     22     41GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; TAS:ProtInc.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
910O60137    357   SWD2_SCHPO Set1 complex component swd2 OS=Sch...323.9     33.5     50     69GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
911Q54SA5    408   WDR55_DICDI WD repeat-containing protein 55 h...684.1     33.5     28     50
912Q9NRG9    546   AAAS_HUMAN Aladin OS=Homo sapiens (Human). GN...1204.1     33.9     22     42GO:0005813; C:centrosome; IDA:HPA.::GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005643; C:nuclear pore; IDA:MGI.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0006913; P:nucleocytoplasmic transport; IDA:MGI.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0046822; P:regulation of nucleocytoplasmic transport; NAS:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
913Q6ZMW3    1958   EMAL6_HUMAN Echinoderm microtubule-associated...1126.5     33.5     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
914O13856    361   YEX2_SCHPO Uncharacterized WD repeat-containi...1754.1     33.5     25     44GO:0005730; C:nucleolus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042274; P:ribosomal small subunit biogenesis; ISS:PomBase.
915O16023    428   ESC_MUSDO Polycomb protein esc OS=Musca domes...1214.1     33.5     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
916B3MVL6    322   EIF3I_DROAN Eukaryotic translation initiation...2434.2     33.5     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
917Q54KL5    335   WDR5_DICDI WD repeat-containing protein 5 hom...1264.2     33.5     25     47GO:0035097; C:histone methyltransferase complex; ISS:dictyBase.
GO:0042393; F:histone binding; ISS:dictyBase.
GO:0051568; P:histone H3-K4 methylation; ISS:dictyBase.
918P39108    375   PEX7_YEAST Peroxisomal targeting signal 2 rec...2094.2     33.5     21     42GO:0005829; C:cytosol; IDA:SGD.::GO:0005777; C:peroxisome; IDA:SGD.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016560; P:protein import into peroxisome matrix, docking; IPI:SGD.
919O60336    1514   MABP1_HUMAN Mitogen-activated protein kinase-...1094.3     33.9     27     49
920Q0CQ54    999   HIR1_ASPTN Protein hir1 OS=Aspergillus terreu...1564.3     33.9     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
921Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...554.3     33.5     33     51
922Q9Y7K5    426   YGI3_SCHPO Uncharacterized WD repeat-containi...684.3     33.5     32     54GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
923Q7SEM3    779   ERB1_NEUCR Ribosome biogenesis protein erb-1 ...1294.4     33.9     24     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
924Q2UQ34    335   EIF3I_ASPOR Eukaryotic translation initiation...384.5     33.5     39     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
925A8PWB6    642   BOP1_BRUMA Ribosome biogenesis protein BOP1 h...334.6     33.5     39     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
926Q13112    559   CAF1B_HUMAN Chromatin assembly factor 1 subun...1304.7     33.5     28     41GO:0033186; C:CAF-1 complex; IDA:UniProtKB.::GO:0005813; C:centrosome; IDA:HPA.
GO:0003682; F:chromatin binding; TAS:ProtInc.::GO:0042393; F:histone binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; TAS:ProtInc.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006335; P:DNA replication-dependent nucleosome assembly; TAS:ProtInc.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
927Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...1128.5     33.1     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
928A7TMF9    453   YTM1_VANPO Ribosome biogenesis protein YTM1 O...1644.7     33.5     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
929Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...1326.9     32.7     26     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
930P55735    322   SEC13_HUMAN Protein SEC13 homolog OS=Homo sap...1194.7     33.1     25     50GO:0005829; C:cytosol; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0012507; C:ER to Golgi transport vesicle membrane; TAS:Reactome.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.::GO:0048208; P:COPII vesicle coating; TAS:Reactome.::GO:0006886; P:intracellular protein transport; NAS:UniProtKB.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0043687; P:post-translational protein modification; TAS:Reactome.::GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.
931Q5XFW8    322   SEC13_RAT Protein SEC13 homolog OS=Rattus nor...1194.8     33.1     25     49GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IDA:MGI.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
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