Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...1162.9     33.9     26     44
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
872Q3ZCC9    322   SEC13_BOVIN Protein SEC13 homolog OS=Bos taur...1192.9     33.9     26     49GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
873C4Y5P7    1158   RTC1_CLAL4 Restriction of telomere capping pr...833.9     33.9     29     49GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
874Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...403     33.9     40     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
875Q8LPL5    481   FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabido...1553     34.3     23     46
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
876Q6FQU2    534   YD156_CANGA WD repeat-containing protein CAGL...1273     34.3     25     45
877C7Z6H2    448   LIS1_NECH7 Nuclear distribution protein PAC1 ...1263.1     34.3     27     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
878Q09406    534   A16L2_CAEEL Autophagic-related protein 16.2 O...1273.1     34.3     25     43
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0071688; P:striated muscle myosin thick filament assembly; IMP:WormBase.
879Q9XW12    337   CIAO1_CAEEL Probable cytosolic iron-sulfur pr...763.1     33.9     34     49
GO:0005515; F:protein binding; IPI:IntAct.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0000003; P:reproduction; IMP:WormBase.
880Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...1163.2     33.9     26     44GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
881Q803V5    326   LST8_DANRE Target of rapamycin complex subuni...1163.2     33.9     27     44GO:0005737; C:cytoplasm; ISS:UniProtKB.
882Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...1203.2     34.3     26     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
883C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...443.2     33.9     39     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
884Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...1186     33.1     25     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
885Q10281    314   GBLP_SCHPO Guanine nucleotide-binding protein...553.2     33.9     35     51GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005080; F:protein kinase C binding; IPI:PomBase.::GO:0043022; F:ribosome binding; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0035556; P:intracellular signal transduction; IMP:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.::GO:0031139; P:positive regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IGI:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IGI:PomBase.
886Q99J79    432   DDB2_MOUSE DNA damage-binding protein 2 OS=Mu...1493.2     33.9     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006290; P:pyrimidine dimer repair; IMP:MGI.
887Q95JL5    571   WDR16_MACFA WD repeat-containing protein 16 O...403.3     34.3     35     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
888Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...1133.3     34.3     22     45GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
889Q2YDS1    496   DDB2_DANRE DNA damage-binding protein 2 OS=Da...333.3     33.9     45     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
890Q8N1V2    620   WDR16_HUMAN WD repeat-containing protein 16 O...403.3     34.3     35     68GO:0005737; C:cytoplasm; IDA:HPA.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
891D1ZEM6    486   LIS12_SORMK Nuclear distribution protein PAC1...783.3     33.9     33     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
892Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...1143.4     34.3     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
893O35828    443   CORO7_RAT Coronin-7 OS=Rattus norvegicus (Rat...1693.4     33.9     22     38GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
894Q5BLX8    315   WDR83_RAT WD repeat domain-containing protein...1143.4     33.9     25     45GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
895Q6C4I9    820   ERB1_YARLI Ribosome biogenesis protein ERB1 O...1073.4     34.3     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
896Q21215    325   GBLP_CAEEL Guanine nucleotide-binding protein...1513.4     33.9     25     46GO:0030424; C:axon; IDA:WormBase.::GO:0044297; C:cell body; IDA:WormBase.::GO:0005813; C:centrosome; IDA:WormBase.::GO:0030426; C:growth cone; IDA:WormBase.::GO:0000776; C:kinetochore; IDA:WormBase.::GO:0005635; C:nuclear envelope; IDA:WormBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048675; P:axon extension; IMP:WormBase.::GO:0051304; P:chromosome separation; IMP:WormBase.::GO:0000281; P:cytokinesis after mitosis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0008045; P:motor axon guidance; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040038; P:polar body extrusion after meiotic divisions; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0033365; P:protein localization to organelle; IMP:WormBase.::GO:0030334; P:regulation of cell migration; IMP:WormBase.
897Q5ZKU8    369   PK1IP_CHICK p21-activated protein kinase-inte...1243.4     33.9     26     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
898P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...1143.5     34.3     24     46GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
899Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...1133.5     34.3     22     45GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
900Q7ZVR1    832   WDR75_DANRE WD repeat-containing protein 75 O...323.6     33.9     47     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
901Q0CHM0    309   SEC13_ASPTN Protein transport protein sec13 O...1263.6     33.5     23     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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