Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...1350.46     37     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
632Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...591.8     35     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
633Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...900.47     37     22     42GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
634Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...1130.48     37     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
635Q8CFD5    397   ERCC8_MOUSE DNA excision repair protein ERCC-...1250.48     36.6     22     48
GO:0009411; P:response to UV; IMP:MGI.::GO:0010165; P:response to X-ray; IMP:MGI.
636P36408    347   GBB_DICDI Guanine nucleotide-binding protein ...1120.48     36.6     26     44GO:0005834; C:heterotrimeric G-protein complex; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0031682; F:G-protein gamma-subunit binding; IDA:dictyBase.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007190; P:activation of adenylate cyclase activity; TAS:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; IMP:dictyBase.::GO:0007188; P:G-protein signaling, coupled to cAMP nucleotide second messenger; IDA:dictyBase.::GO:0032320; P:positive regulation of Ras GTPase activity; IMP:dictyBase.::GO:0030826; P:regulation of cGMP biosynthetic process; TAS:dictyBase.
637Q29KQ0    419   WDR12_DROPS Ribosome biogenesis protein WDR12...1293     33.9     24     41GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
638Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...1320.84     35.8     26     43GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
639Q0UNA9    302   SEC13_PHANO Protein transport protein SEC13 O...2330.49     36.2     21     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
640Q498F0    912   WDR44_XENLA WD repeat-containing protein 44 O...900.49     37     28     43GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
641Q6DRF9    387   WDR55_DANRE WD repeat-containing protein 55 O...1110.5     36.6     28     45GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0001654; P:eye development; IMP:UniProtKB.::GO:0060465; P:pharynx development; IMP:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.::GO:0048794; P:swim bladder development; IMP:UniProtKB.::GO:0048538; P:thymus development; IMP:UniProtKB.
642P93339    377   GBB_NICPL Guanine nucleotide-binding protein ...1313     33.9     22     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
643Q0U2T3    681   MDV1_PHANO Mitochondrial division protein 1 O...850.51     36.6     32     51GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
644P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...1300.98     35.4     22     45
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
645B2VR76    781   ERB1_PYRTR Ribosome biogenesis protein erb1 O...1260.53     36.6     28     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
646A5GFN6    368   RAEL1_PIG mRNA export factor OS=Sus scrofa (P...990.53     36.6     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
647Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...720.56     36.6     33     49GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
648Q9VKQ3    420   WDR12_DROME Ribosome biogenesis protein WDR12...710.74     36.2     30     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
649Q61666    1015   HIRA_MOUSE Protein HIRA OS=Mus musculus (Mous...1380.56     36.6     28     43GO:0000790; C:nuclear chromatin; IDA:MGI.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007369; P:gastrulation; IMP:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
650P27133    445   COROA_DICDI Coronin-A OS=Dictyostelium discoi...380.57     36.6     37     63GO:0042995; C:cell projection; IDA:dictyBase.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0007015; P:actin filament organization; ISS:dictyBase.::GO:0006928; P:cellular component movement; IMP:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0006972; P:hyperosmotic response; IEP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:dictyBase.::GO:0006909; P:phagocytosis; IEP:dictyBase.::GO:0009617; P:response to bacterium; IEP:dictyBase.
651Q5RF99    368   RAEL1_PONAB mRNA export factor OS=Pongo abeli...990.59     36.2     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
652P78406    368   RAE1L_HUMAN mRNA export factor OS=Homo sapien...990.59     36.2     29     41GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005856; C:cytoskeleton; TAS:ProtInc.::GO:0005640; C:nuclear outer membrane; TAS:ProtInc.::GO:0005643; C:nuclear pore; TAS:ProtInc.
GO:0008017; F:microtubule binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:ProtInc.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
653O17468    1047   HIRA_DROME Protein HIRA homolog OS=Drosophila...1860.6     36.6     22     39GO:0001673; C:male germ cell nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.
GO:0006336; P:DNA replication-independent nucleosome assembly; IMP:FlyBase.::GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
654Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...351.8     35     49     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
655Q5E9A4    368   RAE1L_BOVIN mRNA export factor OS=Bos taurus ...990.6     36.2     28     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
656Q8BUI3    648   LRWD1_MOUSE Leucine-rich repeat and WD repeat...580.61     36.6     29     48GO:0005721; C:centromeric heterochromatin; ISS:UniProtKB.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005664; C:nuclear origin of replication recognition complex; ISS:UniProtKB.::GO:0031933; C:telomeric heterochromatin; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0071169; P:establishment of protein localization to chromatin; ISS:UniProtKB.::GO:0000080; P:G1 phase of mitotic cell cycle; ISS:UniProtKB.
657Q7TMQ7    748   WDR91_MOUSE WD repeat-containing protein 91 O...1040.62     36.6     21     48
658Q32KQ2    358   WDR53_BOVIN WD repeat-containing protein 53 O...1320.62     36.2     31     46
659Q4R6D2    368   RAE1L_MACFA mRNA export factor OS=Macaca fasc...990.62     36.2     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
660A6PWY4    622   WDR76_MOUSE WD repeat-containing protein 76 O...380.63     36.6     39     74
661B4KKN1    419   WDR12_DROMO Ribosome biogenesis protein WDR12...870.63     36.2     29     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
records
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