Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
601Q2KIG2    334   WDR5_BOVIN WD repeat-containing protein 5 OS=...1260.35     37     26     46GO:0000123; C:histone acetyltransferase complex; ISS:UniProtKB.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; ISS:UniProtKB.
GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
GO:0051568; P:histone H3-K4 methylation; ISS:UniProtKB.::GO:0043984; P:histone H4-K16 acetylation; ISS:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; ISS:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
602Q5APF0    466   YTM1_CANAL Ribosome biogenesis protein YTM1 O...1405.6     33.1     21     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
603Q92828    525   COR2A_HUMAN Coronin-2A OS=Homo sapiens (Human...860.36     37.4     28     43GO:0015629; C:actin cytoskeleton; IBA:RefGenome.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0035556; P:intracellular signal transduction; TAS:ProtInc.
604Q86Y33    519   CD20B_HUMAN Cell division cycle protein 20 ho...1730.36     37     24     43
605Q9UTR9    368   ASA1_SCHPO ASTRA-associated protein 1 OS=Schi...540.36     37     33     56GO:0070209; C:ASTRA complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
606P0C7V8    602   DC8L2_HUMAN DDB1- and CUL4-associated factor ...1260.36     37.4     27     43
607Q9AV81    527   PUB72_ORYSJ U-box domain-containing protein 7...872.5     34.3     32     41GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
608Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...1130.37     37.4     26     47GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
609Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...1390.37     37.4     22     47GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
610A3LTS5    656   DSE1_PICST Protein DSE1 OS=NRRL Y-11545) (Yea...1020.37     37.4     29     47
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.
611Q5VTH9    848   WDR78_HUMAN WD repeat-containing protein 78 O...1260.38     37.4     24     47
612Q8C570    368   RAE1L_MOUSE mRNA export factor OS=Mus musculu...990.38     37     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.
613Q25306    312   GBLP_LEIMA Guanine nucleotide-binding protein...1500.38     36.6     25     44
614B5X9P2    330   CIO1A_SALSA Probable cytosolic iron-sulfur pr...850.38     37     31     48
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
615Q17963    376   TG125_CAEEL WD repeat-containing protein tag-...1260.39     37     25     47GO:0005634; C:nucleus; IDA:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0051568; P:histone H3-K4 methylation; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
616A8XJ40    306   SEC13_CAEBR Protein SEC13 homolog OS=Caenorha...1210.39     36.6     26     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:UniProtKB.
GO:0000910; P:cytokinesis; ISS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
617Q803D2    410   LIS1B_DANRE Lissencephaly-1 homolog B OS=Dani...1140.39     37     25     52GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0045176; P:apical protein localization; IMP:ZFIN.::GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0040023; P:establishment of nucleus localization; IMP:ZFIN.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045494; P:photoreceptor cell maintenance; IMP:ZFIN.::GO:0006810; P:transport; IEA:UniProtKB-KW.
618Q9XS70    486   COR1B_RABIT Coronin-1B OS=Oryctolagus cunicul...1787.5     32.7     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
619Q3SWS8    368   RAE1L_RAT mRNA export factor OS=Rattus norveg...990.4     37     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
620O76071    339   CIAO1_HUMAN Probable cytosolic iron-sulfur pr...1770.54     36.2     21     41GO:0071817; C:MMXD complex; IDA:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; IGI:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
621Q09990    665   LIN23_CAEEL F-box/WD repeat-containing protei...1180.41     37     25     43GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048812; P:neuron projection morphogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
622Q8SQS4    556   TAF5_ENCCU Transcription initiation factor TF...1130.41     37     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
623Q3B7M6    659   NEDD1_BOVIN Protein NEDD1 OS=Bos taurus (Bovi...861     35.8     28     44
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
624Q5RE10    414   TSSC1_PONAB Protein TSSC1 OS=Pongo abelii (Su...1170.42     37     26     40
625P62884    312   GBLP_LEIIN Guanine nucleotide-binding protein...1500.43     36.6     25     44
626P62883    312   GBLP_LEICH Guanine nucleotide-binding protein...1500.43     36.6     25     44
627Q9U2A9    674   BOP1_CAEEL Ribosome biogenesis protein BOP1 h...1480.43     37     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
628Q2KJH4    606   WDR1_BOVIN WD repeat-containing protein 1 OS=...860.45     37     34     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
629Q13216    396   ERCC8_HUMAN DNA excision repair protein ERCC-...1760.46     36.6     19     37GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000109; C:nucleotide-excision repair complex; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
630Q4R4J2    461   COR1A_MACFA Coronin-1A OS=Macaca fascicularis...981.4     35.4     23     46GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
631O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...1350.46     37     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
records
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