Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q32PG3    677   WDR48_BOVIN WD repeat-containing protein 48 O...1340.16     38.5     27     41GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
512Q8TAF3    677   WDR48_HUMAN WD repeat-containing protein 48 O...1340.16     38.5     27     41GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
513O14435    359   GBB_CRYPA Guanine nucleotide-binding protein ...1180.16     38.1     24     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
514Q7RZF5    304   SEC13_NEUCR Protein transport protein sec-13 ...2300.16     37.7     23     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
515Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...1101.3     35     28     46GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
516Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...1140.17     38.1     29     47GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
517Q06440    651   CORO_YEAST Coronin-like protein OS=Saccharomy...1598.1     32.7     19     40GO:0030479; C:actin cortical patch; IDA:SGD.::GO:0005826; C:actomyosin contractile ring; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:SGD.::GO:0008017; F:microtubule binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IDA:SGD.
GO:0051666; P:actin cortical patch localization; IMP:SGD.::GO:0007015; P:actin filament organization; IMP:SGD.::GO:0007017; P:microtubule-based process; IPI:SGD.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD.::GO:2000601; P:positive regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD.
518Q9V3J8    361   WDS_DROME Protein will die slowly OS=Drosophi...1260.27     37.4     26     46GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IPI:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:FlyBase.
GO:0051568; P:histone H3-K4 methylation; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.
519Q9BYB4    327   GNB1L_HUMAN Guanine nucleotide-binding protei...410.17     37.7     37     61GO:0009898; C:internal side of plasma membrane; NAS:UniProtKB.
GO:0007186; P:G-protein coupled receptor signaling pathway; NAS:UniProtKB.::GO:0035556; P:intracellular signal transduction; NAS:UniProtKB.
520P32479    840   HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...1430.17     38.5     27     44GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
521Q17BB0    427   WDR12_AEDAE Ribosome biogenesis protein WDR12...650.17     38.1     28     51GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
522A7TL17    536   YD156_VANPO WD repeat-containing protein Kpol...1330.18     38.1     23     47
523Q32PJ6    339   CIAO1_BOVIN Probable cytosolic iron-sulfur pr...1740.37     37     21     40GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
524P52287    340   GBB3_RAT Guanine nucleotide-binding protein G...1110.31     37     24     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
525Q91854    518   TRCB_XENLA Beta-TrCP OS=Xenopus laevis (Afric...1220.19     38.1     27     42
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
526Q5M8I4    387   TSSC1_XENTR Protein TSSC1 OS=Xenopus tropical...1880.19     37.7     24     38
527P57737    925   CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...421.6     35.4     38     60GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
528Q5M786    334   WDR5_XENTR WD repeat-containing protein 5 OS=...1260.19     37.7     26     46GO:0000123; C:histone acetyltransferase complex; ISS:UniProtKB.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.
GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
GO:0043984; P:histone H4-K16 acetylation; ISS:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; ISS:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; ISS:UniProtKB.::GO:0034968; P:histone lysine methylation; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
529O42858    398   SWD1_SCHPO Set1 complex component swd1 OS=Sch...970.19     37.7     31     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
530B2KIQ4    630   WDR76_RHIFE WD repeat-containing protein 76 O...370.19     38.1     49     70
531Q6BUA6    529   LIS1_DEBHA Nuclear distribution protein PAC1 ...1230.19     38.1     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
532Q6FJ73    337   CIAO1_CANGA Probable cytosolic iron-sulfur pr...920.19     37.7     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
533Q9NW82    654   WDR70_HUMAN WD repeat-containing protein 70 O...1230.2     38.1     28     43
534Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...1160.2     38.1     28     47GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
535O62621    914   COPB2_DROME Coatomer subunit beta' OS=Drosoph...1250.2     38.1     26     48GO:0030126; C:COPI vesicle coat; NAS:UniProtKB.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; NAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0010883; P:regulation of lipid storage; IDA:FlyBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; NAS:UniProtKB.
536C5PFX0    471   LIS1_COCP7 Nuclear distribution protein PAC1 ...440.2     37.7     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
537O13615    473   PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=...1051.3     35.4     27     44GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
538B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...1238.6     32.3     25     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
539Q6H8D5    910   COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza...1250.21     38.1     26     48GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
540Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...1380.6     36.2     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
541Q0UN56    782   ERB1_PHANO Ribosome biogenesis protein ERB1 O...1260.21     38.1     29     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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