Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...1250.087     39.3     26     49GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
452O94365    494   UTP15_SCHPO U3 small nucleolar RNA-associated...1450.088     38.9     28     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.::GO:0034455; C:t-UTP complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
453A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...1130.31     37.4     29     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
454Q5RDY7    353   GBB5_PONAB Guanine nucleotide-binding protein...1140.089     38.9     31     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
455O60136    586   YNS5_SCHPO Uncharacterized WD repeat-containi...1360.089     39.3     26     41GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
456Q80ZD0    353   GBB5_TAMST Guanine nucleotide-binding protein...1140.09     38.9     31     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
457Q4P2E9    932   ERB1_USTMA Ribosome biogenesis protein ERB1 O...2190.091     39.3     26     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
458Q12220    943   UTP12_YEAST U3 small nucleolar RNA-associated...1820.091     39.3     28     37GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
459Q4WTI3    795   ERB1_ASPFU Ribosome biogenesis protein erb1 O...1240.092     39.3     28     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
460Q6NRH1    601   DCAF8_XENLA DDB1- and CUL4-associated factor ...1260.092     39.3     27     44
461B0XQ42    796   ERB1_ASPFC Ribosome biogenesis protein erb1 O...1240.092     39.3     28     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
462Q6PNB6    353   GBB5_RABIT Guanine nucleotide-binding protein...1140.093     38.9     31     46GO:0005634; C:nucleus; ISS:AgBase.::GO:0005886; C:plasma membrane; ISS:AgBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; ISS:AgBase.
463P0CS44    757   MDV1_CRYNJ Mitochondrial division protein 1 O...760.094     39.3     33     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
464P0CS45    757   MDV1_CRYNB Mitochondrial division protein 1 O...760.094     39.3     33     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
465Q28I90    604   DCAF8_XENTR DDB1- and CUL4-associated factor ...1260.094     38.9     27     44
466Q05B17    678   WDR48_XENTR WD repeat-containing protein 48 O...1233     34.3     25     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
467Q8BH44    480   COR2B_MOUSE Coronin-2B OS=Mus musculus (Mouse...1510.9     35.8     19     40GO:0015629; C:actin cytoskeleton; IBA:RefGenome.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
468Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...1790.53     36.2     22     41GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
469Q9Z2Q1    1249   SC31A_RAT Protein transport protein Sec31A OS...1840.46     37     24     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005768; C:endosome; IDA:RGD.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
470A1CQI9    788   ERB1_ASPCL Ribosome biogenesis protein erb1 O...557.2     33.1     40     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
471A8WGE3    480   COR2B_XENTR Coronin-2B OS=Xenopus tropicalis ...1380.34     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
472P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...1300.49     36.6     23     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
473Q0CY32    673   SCONB_ASPTN Probable E3 ubiquitin ligase comp...1150.1     38.9     24     44
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
474Q9UFC0    647   LRWD1_HUMAN Leucine-rich repeat and WD repeat...610.11     38.9     33     49GO:0005721; C:centromeric heterochromatin; IDA:UniProtKB.::GO:0005664; C:nuclear origin of replication recognition complex; IDA:UniProtKB.::GO:0031933; C:telomeric heterochromatin; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0008327; F:methyl-CpG binding; IDA:UniProtKB.::GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006270; P:DNA-dependent DNA replication initiation; TAS:UniProtKB.::GO:0071169; P:establishment of protein localization to chromatin; IDA:UniProtKB.::GO:0000080; P:G1 phase of mitotic cell cycle; IMP:UniProtKB.
475Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...1790.11     38.9     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
476C4JZS6    446   LIS11_UNCRE Nuclear distribution protein PAC1...410.11     38.9     41     61GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
477Q8MY12    780   MHCKC_DICDI Myosin heavy chain kinase C OS=Di...786.6     33.1     29     51GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.::GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IMP:dictyBase.::GO:0045159; F:myosin II binding; ISS:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.
478Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...1160.11     38.9     25     46
479Q758R7    715   MDV1_ASHGO Mitochondrial division protein 1 O...1162.2     34.7     23     47GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
480Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...1150.11     38.9     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
481Q5RHI5    647   DTL_DANRE Denticleless protein homolog OS=Dan...1240.3     37.4     27     44GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IMP:ZFIN.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
records
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