Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...640.61     36.6     28     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
422Q0VA16    622   WDR70_XENTR WD repeat-containing protein 70 O...1300.061     39.7     28     44
423P62882    353   GBB5_RAT Guanine nucleotide-binding protein s...1140.062     39.3     32     46GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:RGD.
424Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...556     33.1     31     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
425Q9VZF4    1326   FBXW7_DROME F-box/WD repeat-containing protei...1050.064     39.7     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; NAS:FlyBase.
GO:0030332; F:cyclin binding; TAS:FlyBase.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0008054; P:cyclin catabolic process; TAS:FlyBase.::GO:0042023; P:DNA endoreduplication; IMP:FlyBase.::GO:0060253; P:negative regulation of glial cell proliferation; IGI:FlyBase.::GO:0045926; P:negative regulation of growth; IMP:FlyBase.::GO:0007096; P:regulation of exit from mitosis; TAS:FlyBase.::GO:0007088; P:regulation of mitosis; IMP:FlyBase.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.
426O94979    1220   SC31A_HUMAN Protein transport protein Sec31A ...1350.21     38.1     24     44GO:0030127; C:COPII vesicle coat; NAS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0048306; F:calcium-dependent protein binding; IPI:UniProtKB.
GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.::GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.::GO:0048208; P:COPII vesicle coating; TAS:Reactome.::GO:0043687; P:post-translational protein modification; TAS:Reactome.::GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0051592; P:response to calcium ion; IDA:UniProtKB.
427Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...1450.067     39.7     26     43GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
428Q9Y7T2    331   YCJ6_SCHPO Uncharacterized WD repeat-containi...1170.068     39.3     28     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
429Q6CXX3    861   HIR1_KLULA Protein HIR1 OS=1267 / NRRL Y-1140...1360.068     39.7     24     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
430Q96MT7    982   WDR52_HUMAN WD repeat-containing protein 52 O...2300.068     39.7     23     39
431O14775    395   GBB5_HUMAN Guanine nucleotide-binding protein...1140.068     39.3     31     46GO:0005834; C:heterotrimeric G-protein complex; NAS:UniProtKB.
GO:0003924; F:GTPase activity; NAS:UniProtKB.::GO:0004871; F:signal transducer activity; NAS:UniProtKB.
432D3TLL6    411   LIS1_GLOMM Lissencephaly-1 homolog OS=Glossin...1960.069     39.3     23     38GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
433A8XYW9    671   BOP1_CAEBR Ribosome biogenesis protein BOP1 h...1500.069     39.7     26     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
434B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...1340.07     39.3     31     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
435P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1170.07     39.3     21     47GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
436Q3TLR7    729   DTL_MOUSE Denticleless protein homolog OS=Mus...1570.56     36.6     24     41GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
437Q32LB0    652   WDR70_BOVIN WD repeat-containing protein 70 O...1160.82     36.2     26     42
438Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...1110.076     38.9     26     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
439Q1DX43    1261   SEC31_COCIM Protein transport protein SEC31 O...1261.9     35     22     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
440A1D3F5    790   ERB1_NEOFI Ribosome biogenesis protein ERB1 O...1240.078     39.3     28     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
441Q95JP0    891   WDR63_MACFA WD repeat-containing protein 63 O...1190.079     39.3     29     39
442A6NGE4    600   DC8L1_HUMAN DDB1- and CUL4-associated factor ...1250.08     39.3     28     40
443B5X3C4    410   LIS1B_SALSA Lissencephaly-1 homolog B OS=Salm...1140.081     38.9     26     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
444Q3UPL0    1230   SC31A_MOUSE Protein transport protein Sec31A ...1840.54     37     23     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
445O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...1120.19     38.1     29     51GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
446B4JPT9    419   WDR12_DROGR Ribosome biogenesis protein WDR12...710.57     36.6     30     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
447Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...1197.2     33.1     27     43GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
448P17343    340   GBB1_CAEEL Guanine nucleotide-binding protein...1100.086     38.9     26     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.
449Q61ZF6    340   GBB1_CAEBR Guanine nucleotide-binding protein...1100.086     38.9     26     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
450Q0D0X6    446   LIS1_ASPTN Nuclear distribution protein nudF ...340.087     38.9     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
451Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...1250.087     39.3     26     49GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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