Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361Q03010    460   UME1_YEAST Transcriptional regulatory protein...2070.025     40.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033698; C:Rpd3L complex; IDA:SGD.::GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0032221; C:Rpd3S complex; IDA:SGD.
GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0016479; P:negative regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0061408; P:positive regulation of transcription from RNA polymerase II promoter in response to heat stress; IMP:SGD.::GO:0040020; P:regulation of meiosis; IGI:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
362Q13610    501   PWP1_HUMAN Periodic tryptophan protein 1 homo...551.9     34.7     31     53GO:0005634; C:nucleus; TAS:ProtInc.
GO:0006351; P:transcription, DNA-dependent; TAS:ProtInc.
363Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...1230.027     40.8     26     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
364Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...1300.027     40.8     27     50GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
365Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...1240.028     40.4     23     46
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
366O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...1100.03     40.4     25     48
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
367Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...1240.032     40.4     23     46
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
368Q8K450    639   SPG16_MOUSE Sperm-associated antigen 16 prote...1450.032     40.4     23     42GO:0035085; C:cilium axoneme; IDA:UniProtKB.::GO:0035086; C:flagellar axoneme; IDA:MGI.::GO:0005874; C:microtubule; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:MGI.
369C4YFX2    511   TUP1_CANAW Transcriptional repressor TUP1 OS=...1110.037     40.4     32     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
370P0CY34    512   TUP1_CANAL Transcriptional repressor TUP1 OS=...1110.037     40.4     32     49GO:0005625; C:soluble fraction; IDA:CGD.
GO:0016337; P:cell-cell adhesion; IMP:CGD.::GO:0071280; P:cellular response to copper ion; IMP:CGD.::GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0044409; P:entry into host; IMP:CGD.::GO:0051834; P:evasion or tolerance of defenses of other organism involved in symbiotic interaction; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0045827; P:negative regulation of isoprenoid metabolic process; IMP:CGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.::GO:0009372; P:quorum sensing; IMP:CGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
371Q0V8F1    915   CORO7_BOVIN Coronin-7 OS=Bos taurus (Bovine)....1211.3     35.4     26     42GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
372A7ECP3    478   YTM1_SCLS1 Ribosome biogenesis protein ytm1 O...1420.034     40.4     24     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
373Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...1101.8     34.7     27     47GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
374A1C7E4    700   SCONB_ASPCL Probable E3 ubiquitin ligase comp...1150.034     40.4     24     45
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
375Q9LXN4    1024   HIRA_ARATH Protein HIRA OS=Arabidopsis thalia...1290.034     40.8     26     47GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
376Q96S15    920   WDR24_HUMAN WD repeat-containing protein 24 O...914.5     33.9     22     47
377Q75AV4    449   PFS2_ASHGO Polyadenylation factor subunit 2 O...1590.035     40.4     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
378Q9NZJ0    730   DTL_HUMAN Denticleless protein homolog OS=Hom...1570.052     40     25     42GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IMP:UniProtKB.::GO:0006513; P:protein monoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0019985; P:translesion synthesis; IDA:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
379Q55E54    962   COROB_DICDI Coronin-B OS=Dictyostelium discoi...680.036     40.4     32     54GO:0031252; C:cell leading edge; IDA:dictyBase.::GO:0042995; C:cell projection; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0005829; C:cytosol; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0001667; P:ameboidal cell migration; IMP:dictyBase.::GO:0031589; P:cell-substrate adhesion; IMP:dictyBase.::GO:0030866; P:cortical actin cytoskeleton organization; IMP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IDA:dictyBase.::GO:0031276; P:negative regulation of lateral pseudopodium assembly; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0009617; P:response to bacterium; IMP:dictyBase.
380Q5JTN6    314   WDR38_HUMAN WD repeat-containing protein 38 O...2880.036     40     21     38
381B8NGT5    706   SCONB_ASPFN Probable E3 ubiquitin ligase comp...1150.037     40.4     24     45
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
382P54311    340   GBB1_RAT Guanine nucleotide-binding protein G...1200.045     39.7     26     48GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010659; P:cardiac muscle cell apoptotic process; IDA:MGI.::GO:0071456; P:cellular response to hypoxia; IDA:MGI.::GO:0007204; P:elevation of cytosolic calcium ion concentration; IMP:RGD.
383P62874    340   GBB1_MOUSE Guanine nucleotide-binding protein...1200.045     39.7     26     48GO:0005834; C:heterotrimeric G-protein complex; IPI:MGI.::GO:0001750; C:photoreceptor outer segment; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007200; P:activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger; IDA:MGI.::GO:0008283; P:cell proliferation; IDA:MGI.::GO:0060041; P:retina development in camera-type eye; IMP:MGI.::GO:0050909; P:sensory perception of taste; IDA:MGI.
384P62873    340   GBB1_HUMAN Guanine nucleotide-binding protein...1200.045     39.7     26     48GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0005624; C:membrane fraction; ISS:BHF-UCL.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; ISS:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; ISS:BHF-UCL.::GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0071380; P:cellular response to prostaglandin E stimulus; ISS:BHF-UCL.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; TAS:ProtInc.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
385P62872    340   GBB1_CANFA Guanine nucleotide-binding protein...1200.045     39.7     26     48
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
386P62871    340   GBB1_BOVIN Guanine nucleotide-binding protein...1200.045     39.7     26     48GO:0005834; C:heterotrimeric G-protein complex; IDA:BHF-UCL.::GO:0005624; C:membrane fraction; IDA:BHF-UCL.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IDA:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; IDA:BHF-UCL.::GO:0071380; P:cellular response to prostaglandin E stimulus; IDA:BHF-UCL.
387Q2UFN8    705   SCONB_ASPOR Probable E3 ubiquitin ligase comp...1150.038     40.4     24     45
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
388Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...1200.043     39.7     26     48
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
389A8PT44    528   YTM1_MALGO Ribosome biogenesis protein YTM1 O...1640.039     40.4     26     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
390Q54D08    304   LST8_DICDI Protein LST8 homolog OS=Dictyostel...1170.92     35.4     21     47GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0031932; C:TORC2 complex; IPI:dictyBase.
GO:0007190; P:activation of adenylate cyclase activity; IMP:dictyBase.::GO:0032148; P:activation of protein kinase B activity; IMP:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0030838; P:positive regulation of actin filament polymerization; IMP:dictyBase.::GO:0043520; P:regulation of myosin II filament assembly; IMP:dictyBase.
391B8M7Q5    667   SCONB_TALSN Probable E3 ubiquitin ligase comp...1150.04     40.4     27     44
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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