Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q99973    2627   TEP1_HUMAN Telomerase protein component 1 OS=...1170.015     42     30     50GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
332Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...1580.015     41.2     24     39
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
333Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...1580.015     41.2     24     39GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
334Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...1141.2     35.4     27     48GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
335O16519    620   GAD1_CAEEL Gastrulation defective protein 1 O...1430.016     41.6     25     47
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042074; P:cell migration involved in gastrulation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:WormBase.
336Q9BQ87    522   TBL1Y_HUMAN F-box-like/WD repeat-containing p...952.7     34.3     26     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
337Q9C827    926   COB22_ARATH Coatomer subunit beta'-2 OS=Arabi...1160.016     41.6     30     50GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
338Q5AZX0    567   PFS2_EMENI Polyadenylation factor subunit 2 O...1830.016     41.6     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
339C4R6H3    500   LIS1_PICPG Nuclear distribution protein PAC1 ...1210.016     41.6     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
340O54929    404   WSB2_MOUSE WD repeat and SOCS box-containing ...1240.016     41.2     23     47
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
341Q5U2M6    591   DCAF8_RAT DDB1- and CUL4-associated factor 8 ...1250.016     41.6     26     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
342Q5T5C0    1151   STXB5_HUMAN Syntaxin-binding protein 5 OS=Hom...1240.017     41.6     27     45GO:0005892; C:acetylcholine-gated channel complex; ISS:BHF-UCL.::GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0008021; C:synaptic vesicle; IEA:UniProtKB-SubCell.
GO:0017075; F:syntaxin-1 binding; ISS:BHF-UCL.
GO:0006887; P:exocytosis; IEA:UniProtKB-KW.::GO:0045921; P:positive regulation of exocytosis; ISS:BHF-UCL.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
343Q91WQ5    589   TAF5L_MOUSE TAF5-like RNA polymerase II p300/...1140.017     41.6     28     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
344P90648    732   MHCKB_DICDI Myosin heavy chain kinase B OS=Di...1370.017     41.6     25     45GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.
345Q6GM71    722   LRWD1_XENLA Leucine-rich repeat and WD repeat...1300.017     41.6     25     40GO:0005721; C:centromeric heterochromatin; ISS:UniProtKB.::GO:0005664; C:nuclear origin of replication recognition complex; ISS:UniProtKB.::GO:0031933; C:telomeric heterochromatin; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0071169; P:establishment of protein localization to chromatin; ISS:UniProtKB.::GO:0000080; P:G1 phase of mitotic cell cycle; ISS:UniProtKB.
346O22785    525   PR19B_ARATH Pre-mRNA-processing factor 19 hom...1110.017     41.2     29     48GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
347Q8K400    1152   STXB5_MOUSE Syntaxin-binding protein 5 OS=Mus...1220.018     41.6     25     43GO:0005892; C:acetylcholine-gated channel complex; IDA:MGI.::GO:0030141; C:secretory granule; NAS:BHF-UCL.
GO:0017075; F:syntaxin-1 binding; IDA:BHF-UCL.
GO:0007409; P:axonogenesis; TAS:BHF-UCL.::GO:0006887; P:exocytosis; IDA:MGI.::GO:0045921; P:positive regulation of exocytosis; IDA:BHF-UCL.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
348A7TR10    1313   RTC1_VANPO Restriction of telomere capping pr...1630.018     41.6     20     44GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
349Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...1580.87     36.2     24     42GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
350Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...1810.019     41.2     22     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
351Q9WU70    1152   STXB5_RAT Syntaxin-binding protein 5 OS=Rattu...1220.02     41.6     25     43GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030141; C:secretory granule; TAS:BHF-UCL.::GO:0008021; C:synaptic vesicle; IEA:UniProtKB-SubCell.
GO:0017075; F:syntaxin-1 binding; IDA:RGD.
GO:0006887; P:exocytosis; IEA:UniProtKB-KW.::GO:0045921; P:positive regulation of exocytosis; TAS:BHF-UCL.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
352Q93YQ1    1344   RTOR1_ARATH Regulatory-associated protein of ...1270.02     41.6     25     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016049; P:cell growth; IMP:TAIR.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
353Q9FMU5    546   UTP18_ARATH U3 small nucleolar RNA-associated...1241     35.8     25     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
354Q8JZX3    405   POC1A_MOUSE POC1 centriolar protein homolog A...1110.057     39.7     26     45GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
355Q6TMK6    340   GBB1_CRIGR Guanine nucleotide-binding protein...1200.046     39.7     26     48
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
356A8IR43    444   WDR12_CHLRE Ribosome biogenesis protein WDR12...1280.045     40     26     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
357Q6BT42    657   DSE1_DEBHA Protein DSE1 OS=0083 / IGC 2968) (...1084     33.9     29     44
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.
358Q2HJ56    500   PWP1_BOVIN Periodic tryptophan protein 1 homo...1630.7     36.2     20     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
359A5DJX5    507   LIS1_PICGU Nuclear distribution protein PAC1 ...1210.024     40.8     28     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
360Q95RJ9    700   EBI_DROME F-box-like/WD repeat-containing pro...1220.67     36.2     28     40GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0017053; C:transcriptional repressor complex; IGI:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0070491; F:repressing transcription factor binding; IPI:FlyBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0042676; P:compound eye cone cell fate commitment; TAS:FlyBase.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IPI:GOC.::GO:0007219; P:Notch signaling pathway; TAS:FlyBase.::GO:0042461; P:photoreceptor cell development; IMP:FlyBase.::GO:0031065; P:positive regulation of histone deacetylation; IDA:FlyBase.::GO:0045572; P:positive regulation of imaginal disc growth; IMP:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:FlyBase.::GO:0042058; P:regulation of epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.::GO:0035220; P:wing disc development; IMP:FlyBase.
361Q03010    460   UME1_YEAST Transcriptional regulatory protein...2070.025     40.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033698; C:Rpd3L complex; IDA:SGD.::GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0032221; C:Rpd3S complex; IDA:SGD.
GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0016479; P:negative regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0061408; P:positive regulation of transcription from RNA polymerase II promoter in response to heat stress; IMP:SGD.::GO:0040020; P:regulation of meiosis; IGI:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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