Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241P62880    340   GBB2_MOUSE Guanine nucleotide-binding protein...1532     34.7     22     41GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
242P62879    340   GBB2_HUMAN Guanine nucleotide-binding protein...1532     34.7     22     41GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0003924; F:GTPase activity; TAS:ProtInc.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
243P11017    340   GBB2_BOVIN Guanine nucleotide-binding protein...1532     34.7     22     41GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
244O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...676.1     33.1     30     49GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
245Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...2350.004     43.5     21     41GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
246B3NQR5    335   CIAO1_DROER Probable cytosolic iron-sulfur pr...1800.003     43.5     24     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
247Q6GPC6    522   TB1RB_XENLA F-box-like/WD repeat-containing p...1430.13     38.5     27     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
248Q96EX3    536   WDR34_HUMAN WD repeat-containing protein 34 O...1600.42     37     21     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
249B5DG67    423   WDR12_SALSA Ribosome biogenesis protein wdr12...704.3     33.5     27     49GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
250Q99J09    342   MEP50_MOUSE Methylosome protein 50 OS=Mus mus...680.39     37     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0060770; P:negative regulation of epithelial cell proliferation involved in prostate gland development; IMP:MGI.::GO:0008284; P:positive regulation of cell proliferation; IGI:MGI.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0060528; P:secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development; IMP:MGI.
251Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...1800.004     43.1     23     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
252A1C6X5    1276   SEC31_ASPCL Protein transport protein sec31 O...1640.026     41.2     21     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
253O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...1730.004     43.5     24     46GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
254P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...1261.4     35.4     25     44GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
255Q8C0M8    701   DNAI1_MOUSE Dynein intermediate chain 1, axon...1590.004     43.5     25     42GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0003351; P:epithelial cilium movement; IMP:MGI.
256A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...1261.4     35.4     25     44GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
257P74442    1191   Y143_SYNY3 Uncharacterized WD repeat-containi...2690.004     43.9     23     41
258A3LQ86    467   YTM1_PICST Ribosome biogenesis protein YTM1 O...1640.004     43.5     24     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
259Q9UT57    608   CFD1_SCHPO Probable cytosolic Fe-S cluster as...2170.004     43.5     23     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; ISS:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
260B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...1800.004     43.1     23     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
261Q3Y8L7    446   WDR69_CHLRE Outer row dynein assembly protein...1150.75     36.2     24     46GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
262Q5RBZ2    342   MEP50_PONAB Methylosome protein 50 OS=Pongo a...681.1     35.4     32     44GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
263B9WN49    1098   RTC1_CANDC Restriction of telomere capping pr...1120.004     43.5     28     52GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
264A5E6M3    1163   RTC1_LODEL Restriction of telomere capping pr...1120.004     43.5     26     50GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
265P78972    488   SLP1_SCHPO WD repeat-containing protein slp1 ...2340.004     43.1     25     42GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
266Q40153    473   LE14B_LITER LEC14B protein OS=var. erythrorhi...1370.004     43.1     23     45
267Q00659    678   SCONB_EMENI Probable E3 ubiquitin ligase comp...1150.004     43.5     27     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
268D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...1120.005     43.5     25     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
269Q5M9G8    549   DCA11_RAT DDB1- and CUL4-associated factor 11...1050.005     43.1     28     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
270O60508    579   PRP17_HUMAN Pre-mRNA-processing factor 17 OS=...1540.005     43.1     23     46GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
271Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...1622     35     25     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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