Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q9GZS0    605   DNAI2_HUMAN Dynein intermediate chain 2, axon...1320.001     45.1     27     44GO:0005858; C:axonemal dynein complex; IMP:MGI.::GO:0035085; C:cilium axoneme; IMP:MGI.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003777; F:microtubule motor activity; IMP:MGI.
GO:0042384; P:cilium assembly; IMP:MGI.
212Q32SG6    964   HIRA_MAIZE Protein HIRA OS=Zea mays (Maize). ...1400.001     45.1     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
213Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...1210.001     45.1     28     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
214Q8TEB1    546   DCA11_HUMAN DDB1- and CUL4-associated factor ...1210.001     45.1     28     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
215P54703    654   DYIN_DICDI Cytoplasmic dynein 1 intermediate ...1150.52     36.6     25     45GO:0005813; C:centrosome; TAS:dictyBase.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
216Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...1361     35.8     25     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
217Q7SZM9    519   TB1RA_XENLA F-box-like/WD repeat-containing p...1430.14     38.5     27     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
218Q9P775    516   YBEG_SCHPO Uncharacterized WD repeat-containi...1350.002     44.7     27     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
219Q7ZVF0    416   POC1A_DANRE POC1 centriolar protein homolog A...1200.43     37     24     46
220Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...1140.43     36.6     25     47GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
221Q5ZJW8    720   DTL_CHICK Denticleless protein homolog OS=Gal...404.1     33.9     40     63GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
222Q2TZG4    610   PFS2_ASPOR Polyadenylation factor subunit 2 O...1830.002     44.7     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
223Q9WUC8    514   PLRG1_RAT Pleiotropic regulator 1 OS=Rattus n...1400.002     44.7     26     42GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
224Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...882.1     34.7     30     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
225A1DHK2    1263   SEC31_NEOFI Protein transport protein sec31 O...1640.029     40.8     21     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
226O43660    514   PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo s...1400.002     44.7     26     42GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
227Q922V4    513   PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus mu...1400.002     44.3     26     42GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
228Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...1440.002     44.3     26     43GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
229Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...1400.002     44.3     26     42GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
230Q91VU6    549   DCA11_MOUSE DDB1- and CUL4-associated factor ...1530.002     44.3     25     48GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
231Q2KJJ5    800   TBL3_BOVIN Transducin beta-like protein 3 OS=...890.47     37     28     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
232O74319    642   TAF73_SCHPO Transcription initiation factor T...1150.002     44.3     30     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; TAS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.
GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
233Q16960    597   DYI3_ANTCR Dynein intermediate chain 3, cilia...1200.003     44.3     26     47GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
234B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...1390.003     43.9     30     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
235P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...1530.4     36.6     24     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
236Q6P0D9    330   CIAO1_DANRE Probable cytosolic iron-sulfur pr...1993.9     33.5     20     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
237Q5RD06    451   POC1B_PONAB POC1 centriolar protein homolog B...2740.023     40.8     23     39GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
238Q9BQA1    342   MEP50_HUMAN Methylosome protein 50 OS=Homo sa...821.7     34.7     28     40GO:0005829; C:cytosol; TAS:Reactome.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IGI:MGI.
GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IGI:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.
239O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...1200.41     36.6     24     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
240P54313    340   GBB2_RAT Guanine nucleotide-binding protein G...1532     34.7     22     41GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.::GO:0043234; C:protein complex; IDA:RGD.
GO:0005246; F:calcium channel regulator activity; IMP:RGD.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
241P62880    340   GBB2_MOUSE Guanine nucleotide-binding protein...1532     34.7     22     41GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
records
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