Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR131C
Length:
511
Number of sequences:
5887
Description:
YMR131C RRB1 SGDID:S000004738, Chr XIII from 534698-533163, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...1380.07     39.7     22     43GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
182Q5AZM3    1282   SEC31_EMENI Protein transport protein sec31 O...1460.001     45.4     24     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
183Q8NFH3    380   NUP43_HUMAN Nucleoporin Nup43 OS=Homo sapiens...1100.0008     45.4     24     49GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
184B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...1800.0008     45.4     24     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
185Q8NBT0    407   POC1A_HUMAN POC1 centriolar protein homolog A...1110.18     38.1     26     45GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
186B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...869.6     32.3     28     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
187Q9HAV0    340   GBB4_HUMAN Guanine nucleotide-binding protein...1640.24     37.4     22     40GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
188Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...700.67     36.2     29     50GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
189P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...1533.6     33.9     22     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
190O76734    579   TUP1_DICDI General transcriptional corepresso...1180.0009     45.4     30     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
191Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...1570.005     43.1     24     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
192B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...868.6     32.3     27     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
193O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...1533.8     33.5     22     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
194A1DHW6    689   SCONB_NEOFI Probable E3 ubiquitin ligase comp...1150.001     45.4     27     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
195Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1150.001     45.4     27     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
196B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1150.001     45.4     27     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
197Q6NX08    422   WDR12_DANRE Ribosome biogenesis protein wdr12...888.9     32.7     28     45GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
198O24467    475   LE14B_PRUAR LEC14B homolog OS=Prunus armeniac...1160.001     45.4     28     46
199Q8C4J7    801   TBL3_MOUSE Transducin beta-like protein 3 OS=...1361.4     35.4     25     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
200Q5XIL8    705   DNAI1_RAT Dynein intermediate chain 1, axonem...1590.001     45.4     25     42GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
201Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...680.55     36.2     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
202Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...1170.001     45.4     29     45GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
203A2AC93    623   DNAI2_MOUSE Dynein intermediate chain 2, axon...1210.001     45.4     28     44GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.
204Q1LV15    415   WDR69_DANRE Outer row dynein assembly protein...1142.4     34.3     27     46GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
GO:0070286; P:axonemal dynein complex assembly; IMP:UniProtKB.::GO:0060285; P:ciliary cell motility; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.
205Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...1210.001     45.1     28     50
206Q2TBP4    407   POC1A_BOVIN POC1 centriolar protein homolog A...1110.088     38.9     26     45GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
207Q96FK6    387   WDR89_HUMAN WD repeat-containing protein 89 O...1970.001     45.1     22     47
208Q38960    346   LWD2_ARATH WD repeat-containing protein LWD2 ...1430.001     44.7     26     46
GO:0043153; P:entrainment of circadian clock by photoperiod; IEP:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
209P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...1230.098     38.9     29     42GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
210Q5GIS3    341   GBB_PINFU Guanine nucleotide-binding protein ...1110.001     44.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
211Q9GZS0    605   DNAI2_HUMAN Dynein intermediate chain 2, axon...1320.001     45.1     27     44GO:0005858; C:axonemal dynein complex; IMP:MGI.::GO:0035085; C:cilium axoneme; IMP:MGI.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003777; F:microtubule motor activity; IMP:MGI.
GO:0042384; P:cilium assembly; IMP:MGI.
records
Previous ‹‹ ›› Next Total records: 1000 181 - 210
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::