Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR128W
Length:
1267
Number of sequences:
5887
Description:
YMR128W ECM16 SGDID:S000004735, Chr XIII from 523696-527499, Genome Release 64-1-1, Verified ORF, "Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP, predominantly nucleolar in distribution, required for 18S rRNA synthesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P45018    1304   HRPA_HAEIN ATP-dependent RNA helicase hrpA ho...2632e-39     164     37     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
62B4NBB0    1432   SPNE_DROWI Probable ATP-dependent RNA helicas...5721e-37     158     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
63Q6P158    1386   DHX57_HUMAN Putative ATP-dependent RNA helica...2122e-29     131     38     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
64Q6P5D3    1388   DHX57_MOUSE Putative ATP-dependent RNA helica...2123e-29     130     38     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
65Q5ZI74    1231   DHX30_CHICK Putative ATP-dependent RNA helica...2874e-30     133     35     51GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
66P0CE10    1787   Y4102_ARATH Putative uncharacterized protein ...2611e-28     129     34     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
67Q2NKY8    1220   DHX30_BOVIN Putative ATP-dependent RNA helica...3615e-29     130     32     48GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68Q7L2E3    1194   DHX30_HUMAN Putative ATP-dependent RNA helica...2895e-29     130     35     50GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69Q5BJS0    1194   DHX30_RAT Putative ATP-dependent RNA helicase...2993e-29     130     34     49GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70Q99PU8    1217   DHX30_MOUSE Putative ATP-dependent RNA helica...2993e-29     130     34     49GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71Q5R607    1194   DHX30_PONAB Putative ATP-dependent RNA helica...2895e-29     130     35     50GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72O60114    1428   YG65_SCHPO Uncharacterized helicase C15C4.05 ...2211e-21     106     31     54GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; ISS:PomBase.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
73Q08211    1270   DHX9_HUMAN ATP-dependent RNA helicase A OS=Ho...2134e-29     130     40     58GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0070937; C:CRD-mediated mRNA stability complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; TAS:ProtInc.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0001085; F:RNA polymerase II transcription factor binding; IPI:BHF-UCL.
GO:0070934; P:CRD-mediated mRNA stabilization; IMP:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.
74Q5R874    1269   DHX9_PONAB ATP-dependent RNA helicase A OS=Po...2135e-29     130     40     58GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
75Q06698    1435   YL419_YEAST Putative ATP-dependent RNA helica...2218e-30     132     38     56GO:0005739; C:mitochondrion; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
76Q28141    1287   DHX9_BOVIN ATP-dependent RNA helicase A OS=Bo...2063e-29     130     39     59GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
77O70133    1380   DHX9_MOUSE ATP-dependent RNA helicase A OS=Mu...2065e-26     120     38     58GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034605; P:cellular response to heat; IDA:MGI.
78Q68FK8    1262   DHX9_XENLA ATP-dependent RNA helicase A-like ...2091e-27     125     39     58GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
79Q22307    1301   DHX9_CAEEL Probable ATP-dependent RNA helicas...2151e-24     115     37     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
80Q296Q5    1433   SPNE_DROPS Probable ATP-dependent RNA helicas...2264e-24     114     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
81B3P3W1    1432   SPNE_DROER Probable ATP-dependent RNA helicas...2952e-25     118     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
82P24785    1293   MLE_DROME Dosage compensation regulator OS=Dr...3245e-27     123     32     46GO:0000785; C:chromatin; IDA:FlyBase.::GO:0016456; C:X chromosome located dosage compensation complex, transcription activating; NAS:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; TAS:FlyBase.::GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0003724; F:RNA helicase activity; NAS:FlyBase.
GO:0048675; P:axon extension; IMP:FlyBase.::GO:0008340; P:determination of adult lifespan; IMP:FlyBase.::GO:0016457; P:dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome; TAS:FlyBase.::GO:0045433; P:male courtship behavior, veined wing generated song production; IGI:FlyBase.
83B4JT42    1434   SPNE_DROGR Probable ATP-dependent RNA helicas...2512e-26     122     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
84Q8NDG6    1382   TDRD9_HUMAN Putative ATP-dependent RNA helica...1804e-19     97.8     34     58GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0071547; C:piP-body; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043046; P:DNA methylation involved in gamete generation; ISS:UniProtKB.::GO:0009566; P:fertilization; ISS:UniProtKB.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007140; P:male meiosis; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0034587; P:piRNA metabolic process; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.
85B4GEU5    1434   SPNE_DROPE Probable ATP-dependent RNA helicas...3139e-25     116     26     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
86B4PRJ9    1436   SPNE_DROYA Probable ATP-dependent RNA helicas...2329e-26     119     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
87Q3MHU3    1384   TDRD9_RAT Putative ATP-dependent RNA helicase...1804e-18     94.7     33     58GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0071547; C:piP-body; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043046; P:DNA methylation involved in gamete generation; ISS:UniProtKB.::GO:0009566; P:fertilization; ISS:UniProtKB.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007140; P:male meiosis; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0034587; P:piRNA metabolic process; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.
88B8A4F4    1342   TDRD9_DANRE Putative ATP-dependent RNA helica...1802e-21     105     38     57GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0071547; C:piP-body; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043046; P:DNA methylation involved in gamete generation; ISS:UniProtKB.::GO:0009566; P:fertilization; ISS:UniProtKB.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007140; P:male meiosis; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0034587; P:piRNA metabolic process; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.
89Q14BI7    1383   TDRD9_MOUSE Putative ATP-dependent RNA helica...1801e-17     92.8     33     57GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0071547; C:piP-body; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043046; P:DNA methylation involved in gamete generation; IMP:UniProtKB.::GO:0009566; P:fertilization; IMP:UniProtKB.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007140; P:male meiosis; IMP:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0034587; P:piRNA metabolic process; IMP:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:UniProtKB.
90O94536    1327   UCP12_SCHPO Putative ATP-dependent RNA helica...2292e-23     111     31     49GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; ISS:PomBase.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
91B3M383    1429   SPNE_DROAN Probable ATP-dependent RNA helicas...2197e-25     116     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
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