Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR116C
Length:
319
Number of sequences:
5887
Description:
YMR116C ASC1 SGDID:S000004722, Chr XIII from 499878-499456,500688-500152, Genome Release 64-1-1, reverse complement, Verified ORF, "G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; represses Gcn4p in the absence of amino acid starvation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q8W1K8    370   MUT11_CHLRE Protein Mut11 OS=Chlamydomonas re...1810.42     35.8     22     33GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
242Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...1560.097     38.1     25     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
243O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...3550.00000000009     66.2     22     39GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
244Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...973.7     33.1     27     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
245Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...414.2     32.7     39     63
246Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...2030.0000002     56.2     22     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
247Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...2660.00000000005     66.6     21     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
248O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...2670.000000000008     68.6     26     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
249O13282    643   TAF5_SCHPO Transcription initiation factor TF...2460.01     41.2     19     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; IC:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IC:PomBase.
250Q8SRB0    334   GBLP_ENCCU Guanine nucleotide-binding protein...3392e-16     81.6     24     44
251P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1230.000000007     60.5     33     50GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
252O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...1530.00005     48.1     24     48
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
253Q9DC48    579   PRP17_MOUSE Pre-mRNA-processing factor 17 OS=...771.7     34.3     31     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
254Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...1300.0001     47.4     28     48
GO:0051297; P:centrosome organization; IMP:FlyBase.
255Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...962.9     33.1     27     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
256Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...1650.000000000001     71.6     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
257Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...2270.000000005     60.5     21     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
258Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...1980.0004     45.4     24     43
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
259Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...2520.0000000001     65.9     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
260Q5BE22    452   PRP46_EMENI Pre-mRNA-splicing factor prp46 OS...1360.000004     51.6     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
261Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...963.4     33.1     27     45GO:0005730; C:nucleolus; IDA:HPA.
262P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...800.31     36.6     26     45GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
263Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...1530.007     41.2     25     37
264O60508    579   PRP17_HUMAN Pre-mRNA-processing factor 17 OS=...771.6     34.3     31     47GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
265Q54RP0    648   AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...2380.026     40     22     36GO:0005737; C:cytoplasm; TAS:dictyBase.
GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
GO:0006486; P:protein glycosylation; IDA:dictyBase.
266Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...1280.00002     49.7     25     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
267P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...1320.0008     44.7     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
268Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...2130.000000000002     70.9     24     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
269Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...1520.01     41.2     22     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
270P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...1320.0008     44.3     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
271Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...1240.000000006     60.8     29     48GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 1000 241 - 270
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::