Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR093W
Length:
513
Number of sequences:
5887
Description:
YMR093W UTP15 SGDID:S000004699, Chr XIII from 454015-455556, Genome Release 64-1-1, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q5RE10    414   TSSC1_PONAB Protein TSSC1 OS=Pongo abelii (Su...781.5     35     29     42
842Q0CLJ4    483   YTM1_ASPTN Ribosome biogenesis protein ytm1 O...711.5     35     31     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
843Q4R571    387   TSSC1_MACFA Protein TSSC1 OS=Macaca fascicula...781.6     35     29     42
844O22607    507   MSI4_ARATH WD-40 repeat-containing protein MS...1181.6     35     24     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0046872; F:metal ion binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
845Q6CT00    512   YD156_KLULA WD repeat-containing protein KLLA...1151.6     35     21     41
846Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...2064.9     33.5     18     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
847B2VWG7    461   LIS1_PYRTR Nuclear distribution protein PAC1 ...1141.6     35     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
848Q12510    522   YD156_YEAST WD repeat-containing protein YDL1...601.8     35     25     55GO:0005737; C:cytoplasm; IDA:SGD.::GO:0000790; C:nuclear chromatin; IDA:SGD.
GO:0003677; F:DNA binding; IDA:SGD.
849Q39578    683   DYI2_CHLRE Dynein, 78 kDa intermediate chain,...371.7     35     41     54GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
850Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...2071.8     35     19     41GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
851Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...2071.8     35     19     41GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
852Q91WQ5    589   TAF5L_MOUSE TAF5-like RNA polymerase II p300/...2661.8     35     24     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
853Q5B4R1    485   YTM1_EMENI Ribosome biogenesis protein ytm1 O...711.8     35     32     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
854Q00659    678   SCONB_EMENI Probable E3 ubiquitin ligase comp...928.5     32.7     24     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
855O74340    436   DCA13_SCHPO Protein sof1 OS=Schizosaccharomyc...1001.8     34.7     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
856Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...2071.9     35     19     41GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
857Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...2071.9     35     19     41GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
858Q7ZY78    396   WDR4_XENLA tRNA (guanine-N(7)-)-methyltransfe...1092     34.7     30     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
859Q54UI3    467   WDR4_DICDI tRNA (guanine-N(7)-)-methyltransfe...1322     34.7     22     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
860B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...1172     34.7     21     40
861Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...842     34.7     23     51GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
862Q1DHE1    1061   HIR1_COCIM Protein HIR1 OS=Coccidioides immit...2082     35     26     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
863Q1DJF7    465   YTM1_COCIM Ribosome biogenesis protein YTM1 O...1152.1     34.7     26     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
864Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...1652.1     34.7     21     42GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
865Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...1562.1     34.3     26     40GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
866Q5R4T8    445   DCA13_PONAB DDB1- and CUL4-associated factor ...1092.2     34.7     24     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
867Q5UQT6    526   YL344_MIMIV Uncharacterized WD repeat-contain...622.2     34.7     32     52
868A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...1462.3     34.7     23     36GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
869O74865    310   WDR85_SCHPO WD repeat-containing protein C18....1732.3     34.3     27     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:PomBase.
870O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...1502.4     34.3     24     45GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
871B7FF06    1171   WDY_DROGR WD repeat-containing protein on Y c...732.4     34.7     29     51
GO:0005509; F:calcium ion binding; IEA:InterPro.
records
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