Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR093W
Length:
513
Number of sequences:
5887
Description:
YMR093W UTP15 SGDID:S000004699, Chr XIII from 454015-455556, Genome Release 64-1-1, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...1841.1     35.4     24     38GO:0005737; C:cytoplasm; ISS:UniProtKB.
812P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...2881.1     35.4     23     40GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
813P90916    417   LIN53_CAEEL Probable histone-binding protein ...1731.2     35.4     23     38GO:0070176; C:DRM complex; IDA:UniProtKB.
GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:UniProtKB.::GO:0048557; P:embryonic digestive tract morphogenesis; IGI:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
814B0FXQ5    1064   WDY_DROAN WD repeat-containing protein on Y c...1131.1     35.8     27     44
GO:0005509; F:calcium ion binding; IEA:InterPro.
815B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...1031.1     35.4     23     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
816Q86W42    341   THOC6_HUMAN THO complex subunit 6 homolog OS=...871.1     35.4     29     46GO:0000445; C:THO complex part of transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
817B7FF12    1068   WDY_DROYA WD repeat-containing protein on Y c...1131.1     35.8     27     44
GO:0005509; F:calcium ion binding; IEA:InterPro.
818Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...1171.1     35     25     39
819Q6NPN9    350   DWA2_ARATH WD repeat-containing protein DWA2 ...1731.2     35.4     21     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.
820Q920J3    472   CORO6_RAT Coronin-6 OS=Rattus norvegicus (Rat...851.2     35.4     25     47GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
821Q6CU59    444   YTM1_KLULA Ribosome biogenesis protein YTM1 O...592.9     34.3     27     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
822A7TR10    1313   RTC1_VANPO Restriction of telomere capping pr...1371.2     35.8     21     42GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
823P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...2231.2     35.8     20     40GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
824Q09855    506   POF11_SCHPO F-box/WD repeat-containing protei...1041.2     35.4     26     47GO:0005829; C:cytosol; IDA:PomBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
825B4F7L9    1069   WDY_DROME WD repeat-containing protein on Y c...1131.3     35.4     27     44
GO:0005509; F:calcium ion binding; IEA:InterPro.
826Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...1561.3     35     26     40GO:0005737; C:cytoplasm; ISS:UniProtKB.
827Q9D0R9    386   WDR89_MOUSE WD repeat-containing protein 89 O...1701.3     35.4     26     41
828Q9Z2K5    326   LST8_RAT Target of rapamycin complex subunit ...1561.3     35     26     40GO:0005829; C:cytosol; IDA:RGD.
829Q24338    425   ESC_DROME Polycomb protein esc OS=Drosophila ...1471.4     35     23     40GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0048096; P:chromatin-mediated maintenance of transcription; NAS:UniProtKB.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IMP:FlyBase.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
830Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...1561.4     35     26     40
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
831Q8IV35    697   WDR49_HUMAN WD repeat-containing protein 49 O...1592.3     34.7     25     42
832P87177    922   YB1C_SCHPO Uncharacterized WD repeat-containi...2071.4     35.4     23     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
833A8XSW2    691   WDR48_CAEBR WD repeat-containing protein 48 h...701.4     35.4     33     54
834Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...1651.4     35     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
835B0DWM8    452   YTM1_LACBS Ribosome biogenesis protein YTM1 O...2011.5     35     26     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
836Q6FKK3    457   YTM1_CANGA Ribosome biogenesis protein YTM1 O...1402.7     34.3     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
837B0Y8S0    528   YD156_ASPFC WD repeat-containing protein AFUB...423.6     33.9     40     48
838Q53HC9    387   TSSC1_HUMAN Protein TSSC1 OS=Homo sapiens (Hu...781.5     35     29     42
839P87141    1313   MIP1_SCHPO WD repeat-containing protein mip1 ...1801.5     35.4     22     38GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0031137; P:regulation of conjugation with cellular fusion; IGI:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
840Q4WLU1    527   YD156_ASPFU WD repeat-containing protein AFUA...423.6     33.9     40     48
841Q5RE10    414   TSSC1_PONAB Protein TSSC1 OS=Pongo abelii (Su...781.5     35     29     42
records
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