Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR091C
Length:
435
Number of sequences:
5887
Description:
YMR091C NPL6 SGDID:S000004697, Chr XIII from 451365-450058, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to form a module important for a broad range of RSC functions; involved in nuclear protein import and maintenance of proper telomere length"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32832    435   RSC7_YEAST Chromatin structure-remodeling com...4350     896     100     100GO:0016586; C:RSC complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006974; P:response to DNA damage stimulus; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
2O94522    390   RSC7_SCHPO Chromatin structure-remodeling com...2873e-51     183     37     57GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
3O74792    515   SNF59_SCHPO SWI/SNF global transcription acti...972e-18     91.3     38     65GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4P43554    623   SWP82_YEAST SWI/SNF global transcription acti...1220.0000000002     66.6     32     48GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IC:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q8N4H0    392   SPA6L_HUMAN Spermatogenesis associated 6-like...1372.5     33.9     28     43
6A7I313    145   FABZ_CAMHC (3R)-hydroxymyristoyl-[acyl-carrie...625.2     32     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016836; F:hydro-lyase activity; IEA:InterPro.
GO:0006633; P:fatty acid biosynthetic process; IEA:InterPro.::GO:0009245; P:lipid A biosynthetic process; IEA:UniProtKB-KW.
7Q84T03    590   RH27_ORYSJ DEAD-box ATP-dependent RNA helicas...1308.5     32.3     25     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
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