Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR078C
Length:
741
Number of sequences:
5887
Description:
YMR078C CTF18 SGDID:S000004683, Chr XIII from 424728-422503, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P49956    741   CTF18_YEAST Chromosome transmission fidelity ...7410     1529     100     100GO:0031390; C:Ctf18 RFC-like complex; IPI:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0043596; C:nuclear replication fork; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:SGD.::GO:0035753; P:maintenance of DNA trinucleotide repeats; IMP:SGD.::GO:0007064; P:mitotic sister chromatid cohesion; IMP:SGD.
2Q9USQ1    960   CTF18_SCHPO Chromosome transmission fidelity ...6571e-68     248     29     49GO:0031390; C:Ctf18 RFC-like complex; TAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005657; C:replication fork; NAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0051455; P:attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation; IMP:PomBase.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0007062; P:sister chromatid cohesion; TAS:PomBase.
3P0C1D3    993   CTF18_EMENI Chromosome transmission fidelity ...8433e-46     181     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
4Q6NU40    1000   CTF18_XENLA Chromosome transmission fidelity ...4793e-43     172     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
5Q8WVB6    975   CTF18_HUMAN Chromosome transmission fidelity ...4533e-39     159     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
6Q8BIW9    969   CTF18_MOUSE Chromosome transmission fidelity ...4776e-38     155     28     46GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
7A1RWU6    413   RFCL_THEPD Replication factor C large subunit...2563e-24     109     26     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
8Q12TX1    497   RFCL_METBU Replication factor C large subunit...4846e-24     109     22     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
9Q58294    516   RFCL_METJA Replication factor C large subunit...2699e-24     109     28     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
10Q54MH9    1401   RFC1_DICDI Probable replication factor C subu...2785e-23     108     28     41GO:0005663; C:DNA replication factor C complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006272; P:leading strand elongation; ISS:dictyBase.::GO:0006298; P:mismatch repair; ISS:dictyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q2NH88    534   RFCL_METST Replication factor C large subunit...2557e-23     107     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
12O26342    479   RFCL_METTH Replication factor C large subunit...2582e-21     102     26     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
13A4WGV3    422   RFCL_PYRAR Replication factor C large subunit...2992e-21     101     26     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
14A6UWR5    474   RFCL_META3 Replication factor C large subunit...3002e-21     101     27     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
15Q46AT6    642   RFCL_METBF Replication factor C large subunit...4443e-21     102     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
16A0B6D7    467   RFCL_METTP Replication factor C large subunit...4044e-21     100     23     38
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
17P35600    986   RFC1_DROME Replication factor C subunit 1 OS=...4024e-21     102     23     40GO:0005663; C:DNA replication factor C complex; NAS:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; NAS:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18B1YC69    422   RFCL_THENV Replication factor C large subunit...2995e-21     99.8     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
19A4FZL6    484   RFCL_METM5 Replication factor C large subunit...3006e-21     100     27     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
20A6VIW1    482   RFCL_METM7 Replication factor C large subunit...3001e-20     99.8     27     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
21A7I781    481   RFCL_METB6 Replication factor C large subunit...2942e-20     99     28     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
22A3MS27    421   RFCL_PYRCJ Replication factor C large subunit...2992e-20     98.2     25     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
23Q8Q084    610   RFCL_METMA Replication factor C large subunit...3193e-20     99.4     24     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
24P35601    1131   RFC1_MOUSE Replication factor C subunit 1 OS=...2733e-20     99.8     27     46GO:0005663; C:DNA replication factor C complex; IEA:InterPro.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
25A9A6N2    484   RFCL_METM6 Replication factor C large subunit...3004e-20     98.2     27     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
26A1RSA3    423   RFCL_PYRIL Replication factor C large subunit...2991e-19     95.9     25     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
27Q8ZYK3    422   RFCL_PYRAE Replication factor C large subunit...2572e-19     95.5     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
28Q8TPU4    607   RFCL_METAC Replication factor C large subunit...3202e-19     96.7     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
29O60182    934   RFC1_SCHPO Replication factor C subunit 1 OS=...2653e-19     96.3     28     47GO:0031390; C:Ctf18 RFC-like complex; TAS:PomBase.::GO:0005663; C:DNA replication factor C complex; TAS:PomBase.::GO:0031391; C:Elg1 RFC-like complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; TAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006272; P:leading strand elongation; ISS:PomBase.
30P35251    1148   RFC1_HUMAN Replication factor C subunit 1 OS=...2975e-19     95.9     26     44GO:0005663; C:DNA replication factor C complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; TAS:ProtInc.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.::GO:0008047; F:enzyme activator activity; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0007004; P:telomere maintenance via telomerase; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
31A2SQR6    476   RFCL_METLZ Replication factor C large subunit...3497e-19     94     23     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
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