Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR078C
Length:
741
Number of sequences:
5887
Description:
YMR078C CTF18 SGDID:S000004683, Chr XIII from 424728-422503, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271Q9CUL5    857   IQCA1_MOUSE IQ and AAA domain-containing prot...1810.019     42     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
272Q3SGT3    341   RUVB_THIDA Holliday junction ATP-dependent DN...380.019     41.6     47     76
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
273Q5WFQ1    463   HSLU_BACSK ATP-dependent protease ATPase subu...1200.019     42     31     48GO:0009376; C:HslUV protease complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0070011; F:peptidase activity, acting on L-amino acid peptides; IEA:InterPro.
274A7I1C5    340   RUVB_CAMHC Holliday junction ATP-dependent DN...420.019     41.6     43     74
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
275Q07590    780   SAV_SULAC Protein SAV OS=NBRC 15157 / NCIMB 1...790.02     42     34     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
276O17071    406   PRS10_CAEEL Probable 26S protease regulatory ...780.02     41.6     36     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0000003; P:reproduction; IMP:WormBase.
277Q5HAK4    331   RUVB_EHRRW Holliday junction ATP-dependent DN...280.02     41.6     54     86
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
278Q5FG39    331   RUVB_EHRRG Holliday junction ATP-dependent DN...280.02     41.6     54     86
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
279O23894    424   PRS6A_BRACM 26S protease regulatory subunit 6...1880.021     41.6     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
280C7PVU9    594   ARC_CATAD Proteasome-associated ATPase OS=102...390.021     42     49     64GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0019941; P:modification-dependent protein catabolic process; IEA:InterPro.::GO:0010498; P:proteasomal protein catabolic process; IEA:InterPro.
281B9MPK5    616   FTSH_ANATD ATP-dependent zinc metalloprotease...920.021     42     36     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
282Q83FV7    666   FTSH_TROWT ATP-dependent zinc metalloprotease...930.021     42     33     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
283Q8CGK3    949   LONM_MOUSE Lon protease homolog, mitochondria...790.021     42     39     49GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IDA:MGI.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IDA:MGI.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IDA:MGI.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0051131; P:chaperone-mediated protein complex assembly; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0007005; P:mitochondrion organization; IBA:RefGenome.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0001666; P:response to hypoxia; IBA:RefGenome.
284Q7NQC5    345   RUVB_CHRVO Holliday junction ATP-dependent DN...380.022     41.6     45     76
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
285Q5R652    681   RAD17_PONAB Cell cycle checkpoint protein RAD...2850.022     42     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:InterPro.
286Q924S5    950   LONM_RAT Lon protease homolog, mitochondrial ...790.022     42     39     49GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IDA:RGD.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IBA:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0007568; P:aging; IEP:RGD.::GO:0043623; P:cellular protein complex assembly; IMP:RGD.::GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0007005; P:mitochondrion organization; IEP:RGD.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0010044; P:response to aluminum ion; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IEP:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.
287Q75JI3    738   NSF_DICDI Vesicle-fusing ATPase OS=Dictyostel...780.022     42     33     53GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006928; P:cellular component movement; IMP:dictyBase.::GO:0006935; P:chemotaxis; IEA:UniProtKB-KW.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
288Q9SEI2    424   PS6AA_ARATH 26S protease regulatory subunit 6...1880.022     41.6     24     41GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.::GO:0000502; C:proteasome complex; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009555; P:pollen development; IGI:TAIR.::GO:0010498; P:proteasomal protein catabolic process; IGI:TAIR.
289A6LTM7    347   RUVB_CLOB8 Holliday junction ATP-dependent DN...530.022     41.6     42     62
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
290Q58556    903   Y1156_METJA Cell division cycle protein 48 ho...740.023     42     38     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
291Q5RDX4    1091   ATAD2_PONAB ATPase family AAA domain-containi...1260.023     42     27     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
292Q9SEX2    523   KTNA1_ARATH Katanin p60 ATPase-containing sub...750.023     41.6     35     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008568; F:microtubule-severing ATPase activity; IEA:EC.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0043622; P:cortical microtubule organization; IMP:TAIR.::GO:0009825; P:multidimensional cell growth; IMP:TAIR.::GO:0009832; P:plant-type cell wall biogenesis; IMP:TAIR.::GO:0010091; P:trichome branching; IMP:TAIR.
293Q5RII9    485   KTNA1_DANRE Katanin p60 ATPase-containing sub...770.024     41.6     35     53GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008568; F:microtubule-severing ATPase activity; IEA:EC.
GO:0048676; P:axon extension involved in development; IMP:ZFIN.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0031122; P:cytoplasmic microtubule organization; IMP:ZFIN.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
294Q6PL18    1390   ATAD2_HUMAN ATPase family AAA domain-containi...1260.024     42     27     40GO:0005634; C:nucleus; IDA:HPA.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
295A8KZE6    353   RUVB_FRASN Holliday junction ATP-dependent DN...470.025     41.2     47     68
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
296B8GGN4    412   PAN_METPE Proteasome-activating nucleotidase ...870.025     41.2     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
297Q9P7J5    355   YJNA_SCHPO Uncharacterized AAA domain-contain...710.026     41.2     37     52GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:PomBase.
GO:0006626; P:protein targeting to mitochondrion; ISS:PomBase.
298Q96372    805   CDC48_CAPAN Cell division cycle protein 48 ho...1800.028     41.6     26     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
299Q03IE9    333   RUVB_STRTD Holliday junction ATP-dependent DN...1090.028     41.2     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
300Q5M2B1    333   RUVB_STRT2 Holliday junction ATP-dependent DN...1090.028     41.2     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
301Q5LXQ9    333   RUVB_STRT1 Holliday junction ATP-dependent DN...1090.028     41.2     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
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