Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR078C
Length:
741
Number of sequences:
5887
Description:
YMR078C CTF18 SGDID:S000004683, Chr XIII from 424728-422503, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121A2SQT3    321   RFCS_METLZ Replication factor C small subunit...2620.00001     52     23     37GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
122Q6L0P4    410   RFCL_PICTO Replication factor C large subunit...2070.00001     52     25     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
123Q2NH89    321   RFCS_METST Replication factor C small subunit...2580.00002     51.2     22     38GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
124Q4JAB0    325   RFCS_SULAC Replication factor C small subunit...2570.00002     50.8     26     38GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
125A5UMF3    315   RFCS_METS3 Replication factor C small subunit...2690.00004     49.7     22     34GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
126Q8SSJ5    780   CDC48_ENCCU Cell division control protein 48 ...1800.00006     50.1     28     41GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
127Q8BPY9    683   FIGL1_MOUSE Fidgetin-like protein 1 OS=Mus mu...770.0001     49.7     42     52GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0046034; P:ATP metabolic process; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0001649; P:osteoblast differentiation; IMP:UniProtKB.::GO:0033687; P:osteoblast proliferation; IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
128Q6PIW4    674   FIGL1_HUMAN Fidgetin-like protein 1 OS=Homo s...770.0001     49.3     42     52GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0046034; P:ATP metabolic process; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0001649; P:osteoblast differentiation; ISS:UniProtKB.::GO:0033687; P:osteoblast proliferation; ISS:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
129Q6GX84    677   FIGL1_RAT Fidgetin-like protein 1 OS=Rattus n...770.0001     49.3     42     52GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0046034; P:ATP metabolic process; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0001649; P:osteoblast differentiation; ISS:UniProtKB.::GO:0033687; P:osteoblast proliferation; ISS:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
130Q6DDU8    655   FIGL1_XENLA Fidgetin-like protein 1 OS=Xenopu...770.0001     49.3     42     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0046034; P:ATP metabolic process; ISS:UniProtKB.
131A4IHT0    656   FIGL1_XENTR Fidgetin-like protein 1 OS=Xenopu...770.0001     49.3     42     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0046034; P:ATP metabolic process; ISS:UniProtKB.
132O14003    342   RFC3_SCHPO Replication factor C subunit 3 OS=...2800.0002     47.8     23     41GO:0031390; C:Ctf18 RFC-like complex; TAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005663; C:DNA replication factor C complex; TAS:PomBase.::GO:0031391; C:Elg1 RFC-like complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0031389; C:Rad17 RFC-like complex; TAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0000077; P:DNA damage checkpoint; IMP:PomBase.::GO:0006261; P:DNA-dependent DNA replication; IC:PomBase.
133A9AH73    355   RUVB_BURM1 Holliday junction ATP-dependent DN...1210.0003     47.4     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
134Q54MD4    347   RFC4_DICDI Probable replication factor C subu...2000.0004     47     27     38GO:0005663; C:DNA replication factor C complex; ISS:dictyBase.::GO:0031391; C:Elg1 RFC-like complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; ISS:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006272; P:leading strand elongation; ISS:dictyBase.::GO:0006298; P:mismatch repair; ISS:dictyBase.
135P38629    340   RFC3_YEAST Replication factor C subunit 3 OS=...2500.0005     46.6     25     40GO:0031390; C:Ctf18 RFC-like complex; IPI:SGD.::GO:0005663; C:DNA replication factor C complex; IDA:SGD.::GO:0031391; C:Elg1 RFC-like complex; IPI:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0031389; C:Rad17 RFC-like complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006272; P:leading strand elongation; IDA:SGD.::GO:0006298; P:mismatch repair; TAS:SGD.::GO:0007062; P:sister chromatid cohesion; IPI:SGD.
136Q9LET7    1022   CI111_ARATH Calmodulin-interacting protein 11...780.0006     47     32     49GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
137Q975D3    327   RFCS_SULTO Replication factor C small subunit...2660.0006     46.2     24     38GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
138Q503W7    362   ATD1B_DANRE ATPase family AAA domain-containi...770.0007     46.2     36     53GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.
139Q7ZZ25    380   ATD1A_DANRE ATPase family AAA domain-containi...770.0008     46.2     38     52GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.
140Q09803    432   VPS4_SCHPO Suppressor protein of bem1/bed5 do...730.001     45.4     34     56GO:0005829; C:cytosol; IDA:PomBase.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0045053; P:protein retention in Golgi apparatus; ISS:PomBase.::GO:0043328; P:protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IMP:PomBase.
141P28737    362   MSP1_YEAST Protein MSP1 OS=Saccharomyces cere...780.002     45.1     37     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006626; P:protein targeting to mitochondrion; IGI:SGD.
142Q5XIK7    488   KATL1_RAT Katanin p60 ATPase-containing subun...770.002     45.1     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008568; F:microtubule-severing ATPase activity; IEA:EC.
143O74445    388   PRS10_SCHPO Probable 26S protease subunit rpt...2360.002     44.7     25     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:PomBase.
GO:0005524; F:ATP binding; ISS:PomBase.::GO:0004175; F:endopeptidase activity; ISS:PomBase.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; NAS:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
144Q8K0T4    488   KATL1_MOUSE Katanin p60 ATPase-containing sub...770.002     44.7     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008568; F:microtubule-severing ATPase activity; IEA:EC.
145P40328    754   TBP6_YEAST Probable 26S protease subunit YTA6...750.002     45.1     37     51GO:0005938; C:cell cortex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
146Q9HRW6    407   PAN1_HALSA Proteasome-activating nucleotidase...740.002     44.7     38     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
147B1YTD9    354   RUVB_BURA4 Holliday junction ATP-dependent DN...1210.003     44.3     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
148A4XJS3    338   RUVB_CALS8 Holliday junction ATP-dependent DN...1020.003     44.3     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
149Q9BW62    490   KATL1_HUMAN Katanin p60 ATPase-containing sub...770.003     44.7     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008568; F:microtubule-severing ATPase activity; IEA:EC.
150A4JBL2    355   RUVB_BURVG Holliday junction ATP-dependent DN...1210.003     44.3     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
151Q93LP2    355   RUVB_BURCE Holliday junction ATP-dependent DN...1210.003     44.3     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
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