Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR075W
Length:
684
Number of sequences:
5887
Description:
YMR075W RCO1 SGDID:S000004680, Chr XIII from 413982-416036, Genome Release 64-1-1, Verified ORF, "Essential subunit of the histone deacetylase Rpd3S complex; interacts with Eaf3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q04996    723   HAT31_ARATH Homeobox protein HAT3.1 OS=Arabid...690.058     40.4     30     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IDA:TAIR.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
92Q9D4H9    881   PHF14_MOUSE PHD finger protein 14 OS=Mus musc...370.063     40.4     43     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
93P50947    330   PHO23_YEAST Transcriptional regulatory protei...810.063     39.7     33     52GO:0033698; C:Rpd3L complex; IDA:SGD.::GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.
GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IPI:SGD.::GO:0061188; P:negative regulation of chromatin silencing at rDNA; IMP:SGD.::GO:0061186; P:negative regulation of chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0016479; P:negative regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0061408; P:positive regulation of transcription from RNA polymerase II promoter in response to heat stress; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
94P58267    380   DPF1_CHICK Zinc finger protein neuro-d4 OS=Ga...750.072     39.7     27     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
95Q9UIF8    2168   BAZ2B_HUMAN Bromodomain adjacent to zinc fing...480.087     40     35     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; NAS:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; NAS:BHF-UCL.
96A9LMC0    391   DPF3_DANRE Zinc finger protein DPF3 OS=Danio ...480.096     39.3     38     50GO:0016514; C:SWI/SNF complex; ISS:ZFIN.
GO:0042393; F:histone binding; ISS:ZFIN.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0055008; P:cardiac muscle tissue morphogenesis; IMP:ZFIN.::GO:0016568; P:chromatin modification; ISS:ZFIN.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
97Q9DE13    2130   BAZ2B_CHICK Bromodomain adjacent to zinc fing...720.1     39.7     32     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
98Q23541    1477   KDM5_CAEEL Lysine-specific demethylase rbr-2 ...500.1     39.7     38     50GO:0005634; C:nucleus; IDA:WormBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0034648; F:histone demethylase activity (H3-dimethyl-K4 specific); IDA:WormBase.::GO:0034647; F:histone demethylase activity (H3-trimethyl-K4 specific); IDA:WormBase.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0040028; P:regulation of vulval development; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
99P87233    461   PHF1_SCHPO SWM histone demethylase complex su...854.8     33.9     27     48GO:0033193; C:Lsd1/2 complex; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0034605; P:cellular response to heat; IEP:PomBase.::GO:0033169; P:histone H3-K9 demethylation; IMP:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
100Q8VDF2    782   UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1...350.19     38.9     40     60GO:0000792; C:heterochromatin; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; TAS:MGI.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
101Q09908    538   PHF2_SCHPO SWM histone demethylase complex su...510.2     38.5     37     49GO:0033193; C:Lsd1/2 complex; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0034605; P:cellular response to heat; IEP:PomBase.::GO:0033169; P:histone H3-K9 demethylation; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
102B7ZS37    1698   BAZ2A_XENLA Bromodomain adjacent to zinc fing...870.21     38.9     28     46GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
103Q92784    378   DPF3_HUMAN Zinc finger protein DPF3 OS=Homo s...500.23     38.1     34     50GO:0071565; C:nBAF complex; ISS:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
104P58269    378   DPF3_MOUSE Zinc finger protein DPF3 OS=Mus mu...500.23     38.1     34     50GO:0071565; C:nBAF complex; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
105Q9QX66    387   DPF1_MOUSE Zinc finger protein neuro-d4 OS=Mu...500.37     37.4     34     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071565; C:nBAF complex; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
106Q7TPK1    774   UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 O...710.4     37.7     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
107Q61103    391   REQU_MOUSE Zinc finger protein ubi-d4 OS=Mus ...500.45     37.4     34     48GO:0005634; C:nucleus; IDA:MGI.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
108Q9VWF2    2006   SAYP_DROME Supporter of activation of yellow ...460.54     37.4     30     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000791; C:euchromatin; IDA:UniProtKB.::GO:0000792; C:heterochromatin; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005701; C:polytene chromosome chromocenter; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016458; P:gene silencing; IMP:UniProtKB.::GO:0007480; P:imaginal disc-derived leg morphogenesis; IMP:FlyBase.::GO:0031936; P:negative regulation of chromatin silencing; IGI:FlyBase.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.
109Q7TMI3    803   UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2...360.58     37     42     61GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; ISS:HGNC.::GO:0008283; P:cell proliferation; ISS:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:HGNC.
110Q9C8E1    622   ORTH4_ARATH Putative E3 ubiquitin-protein lig...520.59     37     31     44GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0010428; F:methyl-CpNpG binding; ISS:UniProtKB.::GO:0010429; F:methyl-CpNpN binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010424; P:DNA methylation on cytosine within a CG sequence; ISS:UniProtKB.
111Q8VZJ1    352   ATXR5_ARATH Histone-lysine N-methyltransferas...1210.62     36.6     26     41GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0046976; F:histone methyltransferase activity (H3-K27 specific); IDA:TAIR.::GO:0005515; F:protein binding; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0009555; P:pollen development; IMP:TAIR.::GO:0051726; P:regulation of cell cycle; IEP:TAIR.::GO:0006275; P:regulation of DNA replication; IGI:TAIR.
112Q96PU4    802   UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2...470.7     37     34     55GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEP:HGNC.::GO:0008283; P:cell proliferation; IEP:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:HGNC.
113Q92785    391   REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo...500.73     36.6     34     48GO:0005813; C:centrosome; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
114Q9FKA7    617   ORTH1_ARATH E3 ubiquitin-protein ligase ORTHR...300.76     36.6     40     60GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; IDA:TAIR.::GO:0010428; F:methyl-CpNpG binding; IDA:TAIR.::GO:0010429; F:methyl-CpNpN binding; IDA:TAIR.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010424; P:DNA methylation on cytosine within a CG sequence; IMP:UniProtKB.::GO:0090309; P:positive regulation of methylation-dependent chromatin silencing; IMP:UniProtKB.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
115Q9QXV3    279   ING1_MOUSE Inhibitor of growth protein 1 OS=M...580.79     36.2     38     52GO:0005634; C:nucleus; IMP:MGI.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0006606; P:protein import into nucleus; IMP:MGI.::GO:0010941; P:regulation of cell death; IMP:MGI.
116Q61T02    1482   KDM5_CAEBR Lysine-specific demethylase rbr-2 ...500.87     36.6     34     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
117Q9UIF9    1905   BAZ2A_HUMAN Bromodomain adjacent to zinc fing...511.2     36.2     31     47GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; NAS:BHF-UCL.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0000183; P:chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; NAS:UniProtKB.
118Q680I0    623   ORTH5_ARATH E3 ubiquitin-protein ligase ORTHR...301.2     36.2     40     57GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.::GO:0010428; F:methyl-CpNpG binding; ISS:UniProtKB.::GO:0010429; F:methyl-CpNpN binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0090309; P:positive regulation of methylation-dependent chromatin silencing; IMP:UniProtKB.
119Q92782    380   DPF1_HUMAN Zinc finger protein neuro-d4 OS=Ho...351.4     35.4     40     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071565; C:nBAF complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006917; P:induction of apoptosis; TAS:ProtInc.::GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
120P56163    397   DPF1_RAT Zinc finger protein neuro-d4 OS=Ratt...351.4     35.4     40     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071565; C:nBAF complex; ISS:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
121Q9NXR8    418   ING3_HUMAN Inhibitor of growth protein 3 OS=H...791.5     35.4     29     46GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:UniProtKB.::GO:0032777; C:Piccolo NuA4 histone acetyltransferase complex; IDA:UniProtKB.
GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043968; P:histone H2A acetylation; IDA:UniProtKB.::GO:0043967; P:histone H4 acetylation; IDA:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IDA:UniProtKB.::GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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