Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR072W
Length:
183
Number of sequences:
5887
Description:
YMR072W ABF2 SGDID:S000004676, Chr XIII from 411569-412120, Genome Release 64-1-1, Verified ORF, "Mitochondrial DNA-binding protein involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91B2RPK0    211   HGB1A_HUMAN Putative high mobility group prot...1360.0001     44.7     24     46GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
92Q24533    382   DICH_DROME SOX domain-containing protein dich...810.0001     45.4     32     54GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:FlyBase.
GO:0008301; F:DNA binding, bending; IDA:FlyBase.::GO:0003730; F:mRNA 3'-UTR binding; IDA:FlyBase.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.::GO:0008134; F:transcription factor binding; IPI:FlyBase.
GO:0007350; P:blastoderm segmentation; IMP:FlyBase.::GO:0007420; P:brain development; IMP:FlyBase.::GO:0009950; P:dorsal/ventral axis specification; IMP:FlyBase.::GO:0007442; P:hindgut morphogenesis; IMP:FlyBase.::GO:0002168; P:instar larval development; IMP:FlyBase.::GO:0060810; P:intracellular mRNA localization involved in pattern specification process; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0035120; P:post-embryonic appendage morphogenesis; IMP:FlyBase.
93P40646    380   SOX7_MOUSE Transcription factor SOX-7 OS=Mus ...650.032     37.7     28     55GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.
94Q9UVL1    92   NHP6_CANAL Non-histone chromosomal protein 6 ...470.22     33.5     34     62GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:CGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
95O04235    642   SSRP1_VICFA FACT complex subunit SSRP1 OS=Vic...500.0001     45.1     38     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
96Q6CC79    103   NHP6_YARLI Non-histone chromosomal protein 6 ...508.9     29.3     28     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
97Q75B82    94   NHP6_ASHGO Non-histone chromosomal protein 6 ...500.12     34.3     32     58GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
98O42342    362   SOX7_XENLA Transcription factor Sox-7 OS=Xeno...650.031     37.7     26     57GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0001706; P:endoderm formation; IMP:UniProtKB.::GO:0007507; P:heart development; IMP:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
99Q28798    204   SRY_PANTR Sex-determining region Y protein OS...560.0001     44.3     39     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.
100Q9BT81    388   SOX7_HUMAN Transcription factor SOX-7 OS=Homo...650.05     37.4     28     55GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0001706; P:endoderm formation; IDA:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0043280; P:positive regulation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:UniProtKB.::GO:0060828; P:regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
101P47792    297   SX19A_DANRE Transcription factor Sox-19a OS=D...1170.0001     44.7     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
102Q28GD5    362   SOX7_XENTR Transcription factor Sox-7 OS=Xeno...650.031     37.7     26     57GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0001706; P:endoderm formation; ISS:UniProtKB.::GO:0007507; P:heart development; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0048793; P:pronephros development; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
103P0CB47    393   UBFL1_HUMAN Putative upstream-binding factor ...1020.056     37.4     25     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
104Q8WW32    186   HMGB4_HUMAN High mobility group protein B4 OS...1400.014     38.5     23     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
105Q6WRX6    181   MATMC_SCHKA Mating-type M-specific polypeptid...670.0002     43.9     27     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
106P0CY17    181   MTMC3_SCHPO Silenced mating-type M-specific p...670.0002     43.9     27     60
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; NAS:PomBase.
GO:0000747; P:conjugation with cellular fusion; NAS:PomBase.::GO:0007531; P:mating type determination; NAS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
107P0CY16    181   MATMC_SCHPO Mating-type M-specific polypeptid...670.0002     43.9     27     60GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; NAS:PomBase.
GO:0000747; P:conjugation with cellular fusion; NAS:PomBase.::GO:0007531; P:mating type determination; NAS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
108C7U331    181   MATMC_SCHPM Mating-type M-specific polypeptid...670.0002     43.9     27     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005816; C:spindle pole body; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
109Q8AWH3    383   SX17A_XENTR Transcription factor Sox-17-alpha...550.92     33.5     25     60GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0007492; P:endoderm development; ISS:UniProtKB.::GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
110O60248    233   SOX15_HUMAN Protein SOX-15 OS=Homo sapiens (H...551.3     32.7     27     58GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006325; P:chromatin organization; NAS:UniProtKB.::GO:0008584; P:male gonad development; TAS:ProtInc.
111P36395    208   SRY_SMIMA Sex-determining region Y protein OS...820.0002     43.9     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
112Q6CVH3    93   NHP6_KLULA Non-histone chromosomal protein 6 ...500.071     35     32     62GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
113Q32L34    194   HMGB4_BOVIN High mobility group protein B4 OS...1500.008     39.3     24     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
114Q09390    235   HMG12_CAEEL High mobility group protein 1.2 O...1670.0003     43.9     25     45GO:0005634; C:nucleus; IDA:WormBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.::GO:0016055; P:Wnt receptor signaling pathway; IGI:WormBase.
115Q6P0E1    315   SOX2_DANRE Transcription factor Sox-2 OS=Dani...670.0003     43.9     31     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IC:ZFIN.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0048592; P:eye morphogenesis; IMP:ZFIN.::GO:0031101; P:fin regeneration; IMP:ZFIN.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
116Q9H6I2    414   SOX17_HUMAN Transcription factor SOX-17 OS=Ho...551.6     32.7     25     60GO:0005667; C:transcription factor complex; IDA:BHF-UCL.
GO:0008013; F:beta-catenin binding; IPI:BHF-UCL.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; ISS:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:BHF-UCL.::GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0001525; P:angiogenesis; ISS:BHF-UCL.::GO:0060913; P:cardiac cell fate determination; IMP:BHF-UCL.::GO:0003142; P:cardiogenic plate morphogenesis; ISS:BHF-UCL.::GO:0048617; P:embryonic foregut morphogenesis; ISS:BHF-UCL.::GO:0060956; P:endocardial cell differentiation; ISS:BHF-UCL.::GO:0060214; P:endocardium formation; ISS:BHF-UCL.::GO:0061031; P:endodermal digestive tract morphogenesis; ISS:BHF-UCL.::GO:0060914; P:heart formation; TAS:BHF-UCL.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IMP:BHF-UCL.::GO:0030308; P:negative regulation of cell growth; IMP:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; ISS:BHF-UCL.::GO:0031648; P:protein destabilization; IMP:BHF-UCL.::GO:0050821; P:protein stabilization; IMP:BHF-UCL.::GO:0060807; P:regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification; ISS:BHF-UCL.::GO:0072001; P:renal system development; IMP:BHF-UCL.::GO:0001570; P:vasculogenesis; ISS:BHF-UCL.
117P11633    99   NHP6B_YEAST Non-histone chromosomal protein 6...500.19     33.9     30     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.
GO:0008301; F:DNA binding, bending; IDA:SGD.::GO:0031491; F:nucleosome binding; ISS:SGD.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0070898; P:RNA polymerase III transcriptional preinitiation complex assembly; IDA:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IGI:SGD.
118P48431    317   SOX2_HUMAN Transcription factor SOX-2 OS=Homo...670.0003     43.5     31     57GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005667; C:transcription factor complex; TAS:BHF-UCL.
GO:0035198; F:miRNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0007050; P:cell cycle arrest; IDA:UniProtKB.::GO:0006325; P:chromatin organization; NAS:UniProtKB.::GO:0001714; P:endodermal cell fate specification; IDA:MGI.::GO:0021781; P:glial cell fate commitment; NAS:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0050680; P:negative regulation of epithelial cell proliferation; IDA:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0097150; P:neuronal stem cell maintenance; ISS:UniProtKB.::GO:0001649; P:osteoblast differentiation; IDA:UniProtKB.::GO:0043410; P:positive regulation of MAPK cascade; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043281; P:regulation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:UniProtKB.::GO:0070848; P:response to growth factor stimulus; IDA:UniProtKB.::GO:0009611; P:response to wounding; IEP:UniProtKB.::GO:0035019; P:somatic stem cell maintenance; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
119P54231    320   SOX2_SHEEP Transcription factor SOX-2 OS=Ovis...670.0003     43.5     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:BHF-UCL.
GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0097150; P:neuronal stem cell maintenance; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
120Q6NVN0    311   SOX2_XENTR Transcription factor Sox-2 OS=Xeno...1060.0003     43.5     28     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
121P35713    384   SOX18_HUMAN Transcription factor SOX-18 OS=Ho...550.84     33.5     25     58GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0001525; P:angiogenesis; IEP:UniProtKB.::GO:0043534; P:blood vessel endothelial cell migration; IEP:UniProtKB.::GO:0060956; P:endocardial cell differentiation; ISS:BHF-UCL.::GO:0060214; P:endocardium formation; ISS:BHF-UCL.::GO:0061028; P:establishment of endothelial barrier; IMP:UniProtKB.::GO:0001947; P:heart looping; ISS:BHF-UCL.::GO:0001946; P:lymphangiogenesis; IMP:UniProtKB.::GO:0060836; P:lymphatic endothelial cell differentiation; ISS:BHF-UCL.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; ISS:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001570; P:vasculogenesis; ISS:BHF-UCL.
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