Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR072W
Length:
183
Number of sequences:
5887
Description:
YMR072W ABF2 SGDID:S000004676, Chr XIII from 411569-412120, Genome Release 64-1-1, Verified ORF, "Mitochondrial DNA-binding protein involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0C6E5    187   HMG3M_HUMAN Putative high mobility group prot...1400.00004     45.4     26     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
62Q6GLH8    373   S17B2_XENTR Transcription factor Sox-17-beta....650.34     34.7     26     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
63Q293F6    727   SSRP1_DROPS FACT complex subunit Ssrp1 OS=Dro...420.00001     47.8     48     64GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
64Q4PBZ9    99   NHP6_USTMA Non-histone chromosomal protein 6 ...802.9     30.4     26     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
65Q24537    393   HMG2_DROME High mobility group protein DSP1 O...1420.00002     47.4     25     49GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0005700; C:polytene chromosome; IDA:FlyBase.
GO:0008301; F:DNA binding, bending; IDA:FlyBase.::GO:0003697; F:single-stranded DNA binding; NAS:UniProtKB.::GO:0017025; F:TBP-class protein binding; IPI:FlyBase.
GO:0006338; P:chromatin remodeling; IMP:FlyBase.::GO:0006268; P:DNA unwinding involved in replication; NAS:UniProtKB.::GO:0035218; P:leg disc development; IMP:FlyBase.::GO:0008348; P:negative regulation of antimicrobial humoral response; IMP:FlyBase.::GO:0017055; P:negative regulation of RNA polymerase II transcriptional preinitiation complex assembly; IDA:FlyBase.::GO:0043388; P:positive regulation of DNA binding; IDA:FlyBase.::GO:0007379; P:segment specification; IMP:FlyBase.
66P36981    382   MATB_NEUCS Mating-type protein a-1 OS=Neurosp...500.00002     47.4     42     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
67Q28778    204   SRY_PANPA Sex-determining region Y protein OS...560.00002     46.6     41     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
68Q90ZH9    377   S17AB_XENLA Transcription factor Sox-17-alpha...550.63     33.9     25     60GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0042074; P:cell migration involved in gastrulation; IMP:UniProtKB.::GO:0007492; P:endoderm development; IMP:UniProtKB.::GO:0007442; P:hindgut morphogenesis; IMP:UniProtKB.::GO:0007494; P:midgut development; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
69P40644    200   HMGH_STRPU High mobility group protein 1 homo...764.8     30.8     28     46GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
70P40656    669   SOX14_DROME Putative transcription factor SOX...821.1     33.5     27     49GO:0005634; C:nucleus; IMP:FlyBase.
GO:0008301; F:DNA binding, bending; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.
GO:0048813; P:dendrite morphogenesis; IGI:FlyBase.::GO:0007552; P:metamorphosis; IMP:FlyBase.::GO:0016322; P:neuron remodeling; IGI:FlyBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
71Q8AWH2    376   S17B1_XENTR Transcription factor Sox-17-beta....650.25     35     26     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
72Q9P0W2    317   HM20B_HUMAN SWI/SNF-related matrix-associated...610.00006     45.8     31     59GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0007596; P:blood coagulation; TAS:Reactome.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
73P26584    207   HMGB2_CHICK High mobility group protein B2 OS...1430.002     40.8     26     45GO:0000793; C:condensed chromosome; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0008301; F:DNA binding, bending; ISS:UniProtKB.
GO:0006288; P:base-excision repair, DNA ligation; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
74Q32L68    317   HM20B_BOVIN SWI/SNF-related matrix-associated...610.00007     45.4     31     59GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
75Q9Z104    317   HM20B_MOUSE SWI/SNF-related matrix-associated...710.00004     46.2     32     55GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
76Q32PP9    238   SOX14_DANRE Transcription factor Sox-14 OS=Da...670.00004     46.2     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0021854; P:hypothalamus development; IMP:ZFIN.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
77A5D8R3    373   S17B3_XENLA Transcription factor Sox-17-beta....650.045     37.4     26     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
78O42601    373   S17B1_XENLA Transcription factor Sox-17-beta....650.11     36.2     26     57GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0007492; P:endoderm development; IMP:UniProtKB.::GO:0007369; P:gastrulation; IEA:UniProtKB-KW.::GO:0007494; P:midgut development; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IGI:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
79A4QNG3    239   SOX14_XENTR Transcription factor Sox-14 OS=Xe...670.00005     45.8     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
80P61259    240   SOX14_MACFA Transcription factor SOX-14 OS=Ma...670.00006     45.4     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
81O95416    240   SOX14_HUMAN Transcription factor SOX-14 OS=Ho...670.00006     45.4     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0007399; P:nervous system development; TAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
82Q9W7R6    240   SOX14_CHICK Transcription factor SOX-14 OS=Ga...670.00006     45.4     33     58GO:0005634; C:nucleus; IC:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
83B0ZTE2    239   SOX14_XENLA Transcription factor Sox-14 OS=Xe...670.00006     45.4     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0007399; P:nervous system development; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
84Q04892    240   SOX14_MOUSE Transcription factor SOX-14 OS=Mu...670.00006     45.4     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
85B3DLD3    362   SOX18_XENTR Transcription factor Sox-18 OS=Xe...550.88     33.5     25     58GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0007507; P:heart development; ISS:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
86Q90ZH7    361   SX18B_XENLA Transcription factor Sox-18B OS=X...1270.66     33.9     20     42GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0007507; P:heart development; IMP:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
87Q3KQ35    380   S17AA_XENLA Transcription factor Sox-17-alpha...550.37     34.7     27     60GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0042074; P:cell migration involved in gastrulation; IMP:UniProtKB.::GO:0007492; P:endoderm development; IMP:UniProtKB.::GO:0007440; P:foregut morphogenesis; IMP:UniProtKB.::GO:0007442; P:hindgut morphogenesis; IMP:UniProtKB.::GO:0007494; P:midgut development; IMP:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
88P40628    242   HMGH_IIV6 High mobility group protein homolog...1210.00008     45.4     27     51GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
89Q90ZH8    363   SX18A_XENLA Transcription factor Sox-18A OS=X...551.5     32.7     25     56GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
90P36389    223   SRY_HORSE Sex-determining region Y protein OS...659.5     30     22     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
91B2RPK0    211   HGB1A_HUMAN Putative high mobility group prot...1360.0001     44.7     24     46GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
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