Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR072W
Length:
183
Number of sequences:
5887
Description:
YMR072W ABF2 SGDID:S000004676, Chr XIII from 411569-412120, Genome Release 64-1-1, Verified ORF, "Mitochondrial DNA-binding protein involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q0P5K4    619   TOX4_BOVIN TOX high mobility group box family...610.77     33.9     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
152O57401    373   SOX1_CHICK Transcription factor SOX-1 OS=Gall...670.0008     42.4     30     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
153Q6IRR0    594   TOX4B_XENLA TOX high mobility group box famil...610.94     33.5     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
154A4QNP0    597   TOX4_XENTR TOX high mobility group box family...610.95     33.5     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
155O00570    391   SOX1_HUMAN Transcription factor SOX-1 OS=Homo...670.0009     42.4     30     57GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0001046; F:core promoter sequence-specific DNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006325; P:chromatin organization; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
156Q2Z1R2    340   SOX1B_DANRE Transcription factor Sox-1b OS=Da...670.0009     42.4     30     57GO:0005667; C:transcription factor complex; IC:ZFIN.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
157A2TED3    401   SOX1_XENTR Transcription factor Sox-1 OS=Xeno...670.001     42.4     30     57GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
158P53783    391   SOX1_MOUSE Transcription factor SOX-1 OS=Mus ...670.001     42.4     30     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
159Q6TC50    234   SRY_FELCA Sex-determining region Y protein OS...656.5     30.8     23     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
160P48433    312   SOX3_CHICK Transcription factor SOX-3 OS=Gall...620.001     42.4     34     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; ISS:UniProtKB.::GO:0001106; F:RNA polymerase II transcription corepressor activity; ISS:UniProtKB.
GO:0060324; P:face development; ISS:UniProtKB.::GO:0021854; P:hypothalamus development; ISS:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; IMP:UniProtKB.::GO:0021983; P:pituitary gland development; ISS:UniProtKB.::GO:0007423; P:sensory organ development; ISS:UniProtKB.
161P36396    232   SRY_URSAR Sex-determining region Y protein OS...790.001     42     32     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
162Q05066    204   SRY_HUMAN Sex-determining region Y protein OS...655     30.8     25     54GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; NAS:UniProtKB.::GO:2000020; P:positive regulation of male gonad development; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.
163P48046    204   SRY_GORGO Sex-determining region Y protein OS...655.4     30.8     25     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
164P36393    208   SRY_PIG Sex-determining region Y protein OS=S...650.7     33.5     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
165Q9DDD7    292   SX19B_DANRE Transcription factor Sox-19b OS=D...620.001     42     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
166Q05344    723   SSRP1_DROME FACT complex subunit Ssrp1 OS=Dro...400.001     42.4     43     63GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0035101; C:FACT complex; IDA:FlyBase.
GO:0031492; F:nucleosomal DNA binding; IDA:FlyBase.::GO:0043621; F:protein self-association; IDA:FlyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0001672; P:regulation of chromatin assembly or disassembly; IMP:FlyBase.::GO:0051101; P:regulation of DNA binding; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
167Q6DIJ5    345   HM20A_XENTR High mobility group protein 20A O...1290.001     42     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
168O49597    125   HMGB5_ARATH High mobility group B protein 5 O...700.22     34.3     27     51GO:0000785; C:chromatin; TAS:TAIR.::GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003682; F:chromatin binding; TAS:TAIR.::GO:0003677; F:DNA binding; IDA:TAIR.::GO:0030527; F:structural constituent of chromatin; TAS:TAIR.
GO:0006333; P:chromatin assembly or disassembly; TAS:TAIR.
169Q864Q4    216   SRY_MESST Sex-determining region Y protein OS...653.7     31.2     23     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
170Q6DJL0    597   TOX4A_XENLA TOX high mobility group box famil...611.2     33.1     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
171P43680    377   SOX18_MOUSE Transcription factor SOX-18 OS=Mu...690.34     34.7     22     58GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:MGI.
GO:0048469; P:cell maturation; IDA:MGI.::GO:0035050; P:embryonic heart tube development; IGI:MGI.::GO:0060956; P:endocardial cell differentiation; IGI:MGI.::GO:0060214; P:endocardium formation; IGI:MGI.::GO:0001942; P:hair follicle development; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0001946; P:lymphangiogenesis; IMP:MGI.::GO:0060836; P:lymphatic endothelial cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.::GO:0072091; P:regulation of stem cell proliferation; IDA:MGI.::GO:0048866; P:stem cell fate specification; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
172Q6AZF8    345   HM20A_XENLA High mobility group protein 20A O...820.004     40.4     26     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
173B7SBD2    577   TOX3_RAT TOX high mobility group box family m...611.3     33.1     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0034056; F:estrogen response element binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0019722; P:calcium-mediated signaling; IDA:UniProtKB.::GO:0043524; P:negative regulation of neuron apoptotic process; ISS:UniProtKB.::GO:0045768; P:positive regulation of anti-apoptosis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
174Q28783    233   SRY_PONPY Sex-determining region Y protein OS...657.2     30.4     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
175P51501    227   SRY_CALJA Sex-determining region Y protein OS...654.7     31.2     25     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
176P87057    108   NHP6_SCHPO Non-histone chromosomal protein 6 ...790.001     40     25     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; ISS:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006359; P:regulation of transcription from RNA polymerase III promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
177O54941    411   SMCE1_MOUSE SWI/SNF-related matrix-associated...792.4     32.3     28     48GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:MGI.::GO:0016514; C:SWI/SNF complex; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
178Q969G3    411   SMCE1_HUMAN SWI/SNF-related matrix-associated...792.1     32.3     28     48GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000228; C:nuclear chromosome; TAS:ProtInc.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IPI:UniProtKB.
GO:0003682; F:chromatin binding; TAS:ProtInc.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:BHF-UCL.::GO:0008080; F:N-acetyltransferase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.
GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.
179P36394    121   SRY_RAT Sex-determining region Y protein OS=R...650.94     32.3     25     54GO:0005737; C:cytoplasm; IDA:RGD.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0019899; F:enzyme binding; IPI:RGD.::GO:0043565; F:sequence-specific DNA binding; IMP:RGD.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEP:RGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:RGD.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
180P40639    72   AES4_ALLMI SRY-related protein AES4 OS=Alliga...650.036     35.4     28     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
181Q4WY33    104   NHP6_ASPFU Non-histone chromosomal protein 6 ...500.56     32.7     30     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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