Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR072W
Length:
183
Number of sequences:
5887
Description:
YMR072W ABF2 SGDID:S000004676, Chr XIII from 411569-412120, Genome Release 64-1-1, Verified ORF, "Mitochondrial DNA-binding protein involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121P35713    384   SOX18_HUMAN Transcription factor SOX-18 OS=Ho...550.84     33.5     25     58GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0001525; P:angiogenesis; IEP:UniProtKB.::GO:0043534; P:blood vessel endothelial cell migration; IEP:UniProtKB.::GO:0060956; P:endocardial cell differentiation; ISS:BHF-UCL.::GO:0060214; P:endocardium formation; ISS:BHF-UCL.::GO:0061028; P:establishment of endothelial barrier; IMP:UniProtKB.::GO:0001947; P:heart looping; ISS:BHF-UCL.::GO:0001946; P:lymphangiogenesis; IMP:UniProtKB.::GO:0060836; P:lymphatic endothelial cell differentiation; ISS:BHF-UCL.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; ISS:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001570; P:vasculogenesis; ISS:BHF-UCL.
122Q61473    419   SOX17_MOUSE Transcription factor SOX-17 OS=Mu...551.8     32.7     25     60
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003713; F:transcription coactivator activity; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0060070; P:canonical Wnt receptor signaling pathway; IDA:MGI.::GO:0003142; P:cardiogenic plate morphogenesis; IMP:BHF-UCL.::GO:0042074; P:cell migration involved in gastrulation; IMP:MGI.::GO:0061009; P:common bile duct development; IMP:MGI.::GO:0048617; P:embryonic foregut morphogenesis; IMP:BHF-UCL.::GO:0048568; P:embryonic organ development; IMP:MGI.::GO:0060956; P:endocardial cell differentiation; IGI:MGI.::GO:0060214; P:endocardium formation; IGI:MGI.::GO:0007493; P:endodermal cell fate determination; IDA:MGI.::GO:0061031; P:endodermal digestive tract morphogenesis; IMP:BHF-UCL.::GO:0061010; P:gall bladder development; IMP:MGI.::GO:0001947; P:heart looping; IMP:UniProtKB.::GO:0001828; P:inner cell mass cellular morphogenesis; IMP:MGI.::GO:0042662; P:negative regulation of mesodermal cell fate specification; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0003308; P:negative regulation of Wnt receptor signaling pathway involved in heart development; IMP:BHF-UCL.::GO:0003151; P:outflow tract morphogenesis; IGI:BHF-UCL.::GO:0045597; P:positive regulation of cell differentiation; IDA:MGI.::GO:0045732; P:positive regulation of protein catabolic process; IDA:UniProtKB.::GO:0048643; P:positive regulation of skeletal muscle tissue development; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:2000043; P:regulation of cardiac cell fate specification; IMP:BHF-UCL.::GO:2000035; P:regulation of stem cell division; IMP:MGI.::GO:0072091; P:regulation of stem cell proliferation; IDA:MGI.::GO:0060807; P:regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification; IMP:BHF-UCL.::GO:0021903; P:rostrocaudal neural tube patterning; IMP:MGI.::GO:0023019; P:signal transduction involved in regulation of gene expression; IDA:MGI.::GO:0007283; P:spermatogenesis; IDA:MGI.::GO:0048866; P:stem cell fate specification; IDA:MGI.
123P48432    319   SOX2_MOUSE Transcription factor SOX-2 OS=Mus ...670.0004     43.5     31     57GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0021984; P:adenohypophysis development; IMP:MGI.::GO:0001708; P:cell fate specification; IMP:MGI.::GO:0021987; P:cerebral cortex development; IMP:MGI.::GO:0050973; P:detection of mechanical stimulus involved in equilibrioception; IMP:MGI.::GO:0050910; P:detection of mechanical stimulus involved in sensory perception of sound; IMP:MGI.::GO:0048852; P:diencephalon morphogenesis; IMP:MGI.::GO:0060441; P:epithelial tube branching involved in lung morphogenesis; IDA:MGI.::GO:0021879; P:forebrain neuron differentiation; IMP:MGI.::GO:0042472; P:inner ear morphogenesis; IMP:MGI.::GO:0060235; P:lens induction in camera-type eye; IGI:MGI.::GO:0048286; P:lung alveolus development; IDA:MGI.::GO:0030539; P:male genitalia development; IMP:MGI.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0045668; P:negative regulation of osteoblast differentiation; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0048663; P:neuron fate commitment; IMP:MGI.::GO:0097150; P:neuronal stem cell maintenance; IGI:UniProtKB.::GO:0030910; P:olfactory placode formation; IGI:MGI.::GO:0046148; P:pigment biosynthetic process; IMP:MGI.::GO:0030858; P:positive regulation of epithelial cell differentiation; IDA:MGI.::GO:0002052; P:positive regulation of neuroblast proliferation; IMP:MGI.::GO:0045666; P:positive regulation of neuron differentiation; IMP:MGI.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032526; P:response to retinoic acid; IDA:MGI.::GO:0060042; P:retina morphogenesis in camera-type eye; IMP:MGI.::GO:0043586; P:tongue development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
124Q6BRB4    92   NHP6_DEBHA Non-histone chromosomal protein 6 ...420.46     32.7     36     64GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
125P55863    309   SOX3A_XENLA Transcription factor Sox-3-A OS=X...1060.0004     43.1     27     49GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0001704; P:formation of primary germ layer; IMP:UniProtKB.::GO:0030514; P:negative regulation of BMP signaling pathway; IMP:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
126O42569    311   SOX2_XENLA Transcription factor Sox-2 OS=Xeno...670.0004     43.1     31     57GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
127P48430    315   SOX2_CHICK Transcription factor SOX-2 OS=Gall...670.0005     43.1     31     57
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0045665; P:negative regulation of neuron differentiation; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
128P0CO24    116   NHP6_CRYNJ Non-histone chromosomal protein 6 ...700.0005     41.6     34     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
129P0CO25    116   NHP6_CRYNB Non-histone chromosomal protein 6 ...700.0005     41.6     34     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
130P40657    784   SOX15_DROME Putative transcription factor SOX...550.27     35.4     29     58GO:0005634; C:nucleus; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0043066; P:negative regulation of apoptotic process; IMP:FlyBase.::GO:0008285; P:negative regulation of cell proliferation; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0035220; P:wing disc development; IMP:FlyBase.
131Q6EJB7    300   SOX3_DANRE Transcription factor Sox-3 OS=Dani...670.0005     43.1     31     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007417; P:central nervous system development; IMP:ZFIN.::GO:0030182; P:neuron differentiation; IMP:ZFIN.::GO:0043049; P:otic placode formation; IMP:ZFIN.::GO:0007422; P:peripheral nervous system development; IMP:ZFIN.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
132Q6TC39    218   SRY_MIRAN Sex-determining region Y protein OS...790.0005     42.7     32     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
133Q811W0    276   SOX21_MOUSE Transcription factor SOX-21 OS=Mu...670.0005     43.1     31     57GO:0005634; C:nucleus; IC:MGI.
GO:0003677; F:DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0001942; P:hair follicle development; IMP:MGI.::GO:0043588; P:skin development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
134Q9Y651    276   SOX21_HUMAN Transcription factor SOX-21 OS=Ho...670.0005     43.1     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; ISS:UniProtKB.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; NAS:UniProtKB.
GO:0048863; P:stem cell differentiation; IDA:UniProtKB.
135Q6DGL6    336   SOX1A_DANRE Transcription factor Sox-1a OS=Da...670.0005     43.1     30     57GO:0005667; C:transcription factor complex; IC:ZFIN.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
136Q55C24    141   NHP6_DICDI Non-histone chromosomal protein 6 ...502.5     31.6     28     54GO:0000790; C:nuclear chromatin; ISS:dictyBase.
GO:0003682; F:chromatin binding; ISS:dictyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006325; P:chromatin organization; ISS:dictyBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
137Q8BU11    619   TOX4_MOUSE TOX high mobility group box family...610.66     33.9     25     54GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
138Q5FWM3    307   SOX3B_XENLA Transcription factor Sox-3-B OS=X...620.0006     42.7     34     56GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0001704; P:formation of primary germ layer; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
139Q7S045    103   NHP6_NEUCR Non-histone chromosomal protein 6 ...420.65     32.3     33     62GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
140Q6RVD7    245   SX21B_DANRE Transcription factor Sox-21-B OS=...670.0006     42.7     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
141Q5R6A9    621   TOX4_PONAB TOX high mobility group box family...610.69     33.9     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
142Q68FA4    307   SOX3_XENTR Transcription factor Sox-3 OS=Xeno...670.0007     42.7     31     55GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0001704; P:formation of primary germ layer; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
143P40637    72   AES1_ALLMI SRY-related protein AES1 OS=Alliga...650.043     35.4     28     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
144Q9W7R5    280   SOX21_CHICK Transcription factor SOX-21 OS=Ga...670.0007     42.7     31     57GO:0005634; C:nucleus; IC:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
145Q6TC38    218   SRY_MIRLE Sex-determining region Y protein OS...790.0007     42.4     32     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
146O94842    621   TOX4_HUMAN TOX high mobility group box family...610.71     33.9     25     54GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.::GO:0072357; C:PTW/PP1 phosphatase complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
147Q99PM1    619   TOX4_RAT TOX high mobility group box family m...610.71     33.9     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
148B0ZTE1    262   SOX21_XENLA Transcription factor Sox-21 OS=Xe...670.0007     42.7     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0007399; P:nervous system development; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
149Q2PG84    393   SOX1_XENLA Transcription factor Sox-1 OS=Xeno...670.0007     42.7     30     57GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
150Q28447    204   SRY_HYLLA Sex-determining region Y protein OS...653.6     31.2     25     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030238; P:male sex determination; IEA:InterPro.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
151Q0P5K4    619   TOX4_BOVIN TOX high mobility group box family...610.77     33.9     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
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