Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR061W
Length:
677
Number of sequences:
5887
Description:
YMR061W RNA14 SGDID:S000004665, Chr XIII from 392755-394788, Genome Release 64-1-1, Verified ORF, "Cleavage and polyadenylation factor I (CF I) component; involved in cleavage and polyadenylation of mRNA 3' ends; bridges interaction between Rna15p and Hrp1p in the CF I complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q15020    963   SART3_HUMAN Squamous cell carcinoma antigen r...1891.3     36.2     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
32Q5NVN0    531   KPYM_PONAB Pyruvate kinase isozyme M1 OS=Pong...621.6     35.4     35     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0030955; F:potassium ion binding; IEA:InterPro.::GO:0004743; F:pyruvate kinase activity; IEA:EC.
GO:0006096; P:glycolysis; IEA:UniProtKB-KW.
33Q9X597    1163   C26AA_BACTF Pesticidal crystal protein cry26A...621.7     35.8     31     48
GO:0005102; F:receptor binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:InterPro.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
34Q30PC0    261   PSTB_SULDN Phosphate import ATP-binding prote...972     34.7     28     46GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005315; F:inorganic phosphate transmembrane transporter activity; IEA:InterPro.::GO:0015415; F:phosphate ion transmembrane-transporting ATPase activity; IEA:EC.
35A6LSM6    109   Y1174_CLOB8 UPF0122 protein Cbei_1174 OS=acet...732.3     32.7     30     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0016987; F:sigma factor activity; IEA:InterPro.
GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
36P11980    531   KPYM_RAT Pyruvate kinase isozymes M1/M2 OS=Ra...482.9     34.7     38     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:RGD.
GO:0043531; F:ADP binding; IDA:RGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0030955; F:potassium ion binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:RGD.::GO:0004743; F:pyruvate kinase activity; IDA:RGD.
GO:0006754; P:ATP biosynthetic process; IDA:RGD.::GO:0006096; P:glycolysis; IDA:RGD.::GO:0001889; P:liver development; IDA:RGD.::GO:0031100; P:organ regeneration; IDA:RGD.::GO:0042866; P:pyruvate biosynthetic process; IDA:RGD.::GO:0009629; P:response to gravity; IEP:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0032868; P:response to insulin stimulus; IEP:RGD.::GO:0014870; P:response to muscle inactivity; IEP:RGD.::GO:0007584; P:response to nutrient; IEP:RGD.::GO:0043403; P:skeletal muscle tissue regeneration; IDA:RGD.
37P11974    531   KPYM_RABIT Pyruvate kinase isozymes M1/M2 OS=...623.8     34.3     34     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0030955; F:potassium ion binding; IEA:InterPro.::GO:0004743; F:pyruvate kinase activity; IEA:EC.
GO:0006096; P:glycolysis; IEA:UniProtKB-KW.
38Q6CAR6    736   SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=l...1474.2     34.3     25     38GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
39P16496    523   CP52C_CANMA Cytochrome P450 52A3 OS=Candida m...735.6     33.9     33     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0020037; F:heme binding; IEA:InterPro.::GO:0016712; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; IEA:InterPro.
40Q9USP0    341   EI2BA_SCHPO Translation initiation factor eIF...355.8     33.5     34     66GO:0005829; C:cytosol; IDA:PomBase.::GO:0005851; C:eukaryotic translation initiation factor 2B complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005085; F:guanyl-nucleotide exchange factor activity; ISS:RefGenome.::GO:0003743; F:translation initiation factor activity; ISS:PomBase.
GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.::GO:0006446; P:regulation of translational initiation; ISS:RefGenome.
41P0CO10    726   CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=A...646.7     33.5     30     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
42P0CO11    726   CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=(...646.7     33.5     30     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
43Q9HF03    724   CLF1_CRYNV Pre-mRNA-splicing factor CLF1 OS=g...646.8     33.5     30     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
44Q5REG1    981   SART3_PONAB Squamous cell carcinoma antigen r...2016.8     33.9     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
45Q54Z08    850   SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=D...1189.9     33.1     25     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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