Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR049C
Length:
807
Number of sequences:
5887
Description:
YMR049C ERB1 SGDID:S000004652, Chr XIII from 370517-368094, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481Q4WLM7    467   LIS1_ASPFU Nuclear distribution protein nudF ...763.2     34.7     33     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
482B0XM00    467   LIS1_ASPFC Nuclear distribution protein nudF ...763.2     34.7     33     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
483Q91854    518   TRCB_XENLA Beta-TrCP OS=Xenopus laevis (Afric...1511.2     36.2     28     47
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
484P16649    713   TUP1_YEAST General transcriptional corepresso...390.42     37.7     44     64GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042393; F:histone binding; IDA:SGD.::GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0036033; F:mediator complex binding; IDA:SGD.::GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0043486; P:histone exchange; IMP:SGD.::GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0001198; P:negative regulation of mating-type specific transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
485B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...639.2     33.5     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
486Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...370.43     37.7     41     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
487Q0HKB8    699   MNMC_SHESM tRNA 5-methylaminomethyl-2-thiouri...1360.43     37.7     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016645; F:oxidoreductase activity, acting on the CH-NH group of donors; IEA:InterPro.::GO:0004808; F:tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity; IEA:EC.
488P0CS32    341   EIF3I_CRYNJ Eukaryotic translation initiation...293     34.7     52     69GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
489P0CS33    341   EIF3I_CRYNB Eukaryotic translation initiation...293     34.7     52     69GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
490Q26544    301   WSL17_SCHMA WD repeat-containing protein SL1-...1079.8     33.1     22     46
491A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...550.44     37.7     33     55GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
492Q5GIS3    341   GBB_PINFU Guanine nucleotide-binding protein ...440.45     37.4     34     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
493D1ZEM6    486   LIS12_SORMK Nuclear distribution protein PAC1...680.45     37.7     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
494Q6C7Q4    452   HAT2_YARLI Histone acetyltransferase type B s...1300.46     37.4     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
495Q8C6G8    641   WDR26_MOUSE WD repeat-containing protein 26 O...913.1     35     30     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
496A4IGH4    413   WDR4_DANRE tRNA (guanine-N(7)-)-methyltransfe...540.47     37.4     39     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
497Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...980.47     37.7     33     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
498A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...1850.48     37.7     25     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
499Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...390.48     37.7     44     64GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
500Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...350.49     37.7     43     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
501Q9H7D7    661   WDR26_HUMAN WD repeat-containing protein 26 O...931.3     36.2     30     44GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.
502Q09715    614   TUP11_SCHPO Transcriptional repressor tup11 O...347.7     33.9     35     68GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IGI:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0006342; P:chromatin silencing; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
503Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...341.5     35.8     32     71GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
504B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...712.7     35     30     51
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
505Q9R099    442   TBL2_MOUSE Transducin beta-like protein 2 OS=...800.58     37.4     28     50
506Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...470.58     37.4     36     57GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
507A0JPH4    1311   SCAP_XENLA Sterol regulatory element-binding ...440.59     37.4     36     57GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
508Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...350.6     37.4     43     60GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
509Q6BIL4    562   ATG18_DEBHA Autophagy-related protein 18 OS=0...450.61     37.4     36     60GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
510Q6FJ73    337   CIAO1_CANGA Probable cytosolic iron-sulfur pr...870.61     37     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
511Q96S15    920   WDR24_HUMAN WD repeat-containing protein 24 O...920.62     37.4     27     46
records
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