Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR049C
Length:
807
Number of sequences:
5887
Description:
YMR049C ERB1 SGDID:S000004652, Chr XIII from 370517-368094, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361O24076    325   GBLP_MEDSA Guanine nucleotide-binding protein...400.093     39.7     38     63
362Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...620.13     39.3     34     50GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
363D4DG66    461   LIS1_TRIVH Nuclear distribution protein PAC1 ...1745.3     34.3     29     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
364D4AZ50    461   LIS1_ARTBC Nuclear distribution protein PAC1 ...1745.3     34.3     29     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
365Q9SU78    487   MSI5_ARATH WD-40 repeat-containing protein MS...830.1     39.7     28     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
366B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...1650.11     39.3     27     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
367Q10281    314   GBLP_SCHPO Guanine nucleotide-binding protein...710.33     37.7     30     55GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005080; F:protein kinase C binding; IPI:PomBase.::GO:0043022; F:ribosome binding; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0035556; P:intracellular signal transduction; IMP:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.::GO:0031139; P:positive regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IGI:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IGI:PomBase.
368P97260    1276   SCAP_CRIGR Sterol regulatory element-binding ...470.11     39.7     38     57GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006994; P:positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway; ISS:UniProtKB.::GO:0006993; P:sterol regulatory element binding protein import into nucleus involved in sterol depletion response; IMP:UniProtKB.
369Q5BDJ5    446   CIAO1_EMENI Probable cytosolic iron-sulfur pr...690.11     39.7     32     55
370Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...460.12     39.7     37     57GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
371Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...790.12     39.7     32     51
372O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...460.12     39.7     37     57GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
373A2RRU4    1276   SCAP_RAT Sterol regulatory element-binding pr...470.12     39.7     38     57GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005792; C:microsome; IDA:RGD.::GO:0043234; C:protein complex; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
374A7EZJ5    452   CIAO1_SCLS1 Probable cytosolic iron-sulfur pr...770.12     39.3     30     52
375Q0CCS0    422   CIAO1_ASPTN Probable cytosolic iron-sulfur pr...1870.17     38.9     26     42
376Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...460.13     39.3     37     57GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
377Q3MHE2    521   PRP4_BOVIN U4/U6 small nuclear ribonucleoprot...460.13     39.3     37     57GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
378Q96DI7    357   SNR40_HUMAN U5 small nuclear ribonucleoprotei...1220.13     39.3     26     46GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005732; C:small nucleolar ribonucleoprotein complex; NAS:UniProtKB.::GO:0005682; C:U5 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
379Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...1202.5     35     23     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
380P43601    500   ATG18_YEAST Autophagy-related protein 18 OS=S...460.13     39.3     37     65GO:0005829; C:cytosol; IDA:SGD.::GO:0005768; C:endosome; IDA:SGD.::GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0070772; C:PAS complex; IDA:SGD.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IBA:RefGenome.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0032258; P:CVT pathway; IMP:SGD.::GO:0045324; P:late endosome to vacuole transport; IMP:SGD.::GO:0016236; P:macroautophagy; IDA:SGD.::GO:0030242; P:peroxisome degradation; IMP:SGD.::GO:0034727; P:piecemeal microautophagy of nucleus; IMP:SGD.::GO:0006624; P:vacuolar protein processing; IDA:SGD.
381A7A258    500   ATG18_YEAS7 Autophagy-related protein 18 OS=S...460.13     39.3     37     65GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
382Q00664    444   LIS1_EMENI Nuclear distribution protein nudF ...650.13     39.3     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
383Q5FVB6    396   WDR4_XENTR tRNA (guanine-N(7)-)-methyltransfe...770.13     39.3     34     52GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
384C7Z6H2    448   LIS1_NECH7 Nuclear distribution protein PAC1 ...800.13     39.3     31     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
385Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...450.21     38.5     33     58GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
386P23232    341   GBB_LOLFO Guanine nucleotide-binding protein ...530.14     38.9     34     57
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
387Q09990    665   LIN23_CAEEL F-box/WD repeat-containing protei...490.14     39.3     43     57GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048812; P:neuron projection morphogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
388Q40507    375   GBB3_TOBAC Guanine nucleotide-binding protein...601.7     35.4     32     47
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
389Q9P6N1    335   ATG21_SCHPO Autophagy-related protein 21 OS=S...680.14     38.9     35     57GO:0005829; C:cytosol; ISS:PomBase.::GO:0000329; C:fungal-type vacuole membrane; ISS:PomBase.::GO:0032580; C:Golgi cisterna membrane; IEA:UniProtKB-SubCell.::GO:0070772; C:PAS complex; ISS:RefGenome.
GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; ISS:RefGenome.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0016236; P:macroautophagy; IC:PomBase.::GO:0006623; P:protein targeting to vacuole; ISS:PomBase.
390Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...930.42     37.7     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
391Q93794    587   SEL10_CAEEL F-box/WD repeat-containing protei...4010     33.5     38     55GO:0030424; C:axon; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0046660; P:female sex differentiation; IMP:UniProtKB.::GO:0045746; P:negative regulation of Notch signaling pathway; IGI:UniProtKB.
records
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