Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR049C
Length:
807
Number of sequences:
5887
Description:
YMR049C ERB1 SGDID:S000004652, Chr XIII from 370517-368094, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q9LV28    326   GPLPC_ARATH Guanine nucleotide-binding protei...770.006     43.1     27     53GO:0005730; C:nucleolus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
212C4Q0P6    417   LIS1_SCHMA Lissencephaly-1 homolog OS=Schisto...1244.9     34.3     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
213Q5B8Y3    336   EIF3I_EMENI Eukaryotic translation initiation...720.006     43.1     35     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
214A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...295.1     33.9     48     72GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
215Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...1940.065     40.8     21     38GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
216Q2HBX6    454   LIS11_CHAGB Nuclear distribution protein PAC1...670.006     43.5     34     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
217A6RUL1    335   EIF3I_BOTFB Eukaryotic translation initiation...295.1     33.9     48     72GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
218Q9VU68    608   WDR1_DROME Actin-interacting protein 1 OS=Dro...2230.29     38.5     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:FlyBase.
GO:0030042; P:actin filament depolymerization; IMP:FlyBase.::GO:0001736; P:establishment of planar polarity; IMP:UniProtKB.::GO:0035317; P:imaginal disc-derived wing hair organization; IMP:FlyBase.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0030834; P:regulation of actin filament depolymerization; IMP:UniProtKB.::GO:0045214; P:sarcomere organization; IMP:FlyBase.
219A2CEH0    490   POC1B_DANRE POC1 centriolar protein homolog B...711.5     35.8     23     46
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0060287; P:epithelial cilium movement involved in determination of left/right asymmetry; IMP:ZFIN.::GO:0003014; P:renal system process; IMP:ZFIN.
220Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...802.3     35.4     24     45GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
221Q5ZKU8    369   PK1IP_CHICK p21-activated protein kinase-inte...770.007     43.1     35     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
222Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...420.052     40.4     43     62GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
223Q6TNS2    368   PK1IP_DANRE p21-activated protein kinase-inte...830.007     43.1     33     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
224Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...424.7     34.7     38     48GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
225D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...670.008     43.1     34     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
226Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...381.8     35.4     47     66GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
227P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...1451.2     36.2     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
228O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...796.9     33.9     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
229Q9C0J8    1336   WDR33_HUMAN pre-mRNA 3' end processing protei...1500.11     40     21     42GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; NAS:UniProtKB.
230P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...1451.3     36.2     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
231P32479    840   HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...560.009     43.1     39     61GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
232O42611    1025   HIRA_TAKRU Protein HIRA OS=Takifugu rubripes ...370.6     37.4     43     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
233Q7ZY78    396   WDR4_XENLA tRNA (guanine-N(7)-)-methyltransfe...770.01     42.7     34     55GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
234Q05946    817   UTP13_YEAST U3 small nucleolar RNA-associated...740.01     43.1     34     49GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
235B7FNU7    439   LIS1_PHATC Lissencephaly-1 homolog OS=Phaeoda...910.01     42.7     27     47GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
236A8X8C6    368   TG125_CAEBR WD repeat-containing protein tag-...1110.029     41.2     28     46
237Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...1500.14     39.7     21     42GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
238C1GB49    478   LIS1_PARBD Nuclear distribution protein PAC1 ...676.9     33.9     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
239C0S902    497   LIS1_PARBP Nuclear distribution protein PAC1 ...797.3     33.9     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
240Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...1987.4     33.9     22     38GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
241Q0CXH9    336   EIF3I_ASPTN Eukaryotic translation initiation...720.012     42.4     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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