Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR048W
Length:
317
Number of sequences:
5887
Description:
YMR048W CSM3 SGDID:S000004651, Chr XIII from 366981-367934, Genome Release 64-1-1, Verified ORF, "Replication fork associated factor, required for stable replication fork pausing; component of the DNA replication checkpoint pathway; required for accurate chromosome segregation during meiosis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q04659    317   CSM3_YEAST Chromosome segregation in meiosis ...3170     654     100     100GO:0031298; C:replication fork protection complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006281; P:DNA repair; IMP:SGD.::GO:0000076; P:DNA replication checkpoint; IGI:SGD.::GO:0034087; P:establishment of mitotic sister chromatid cohesion; IMP:SGD.::GO:0043570; P:maintenance of DNA repeat elements; IMP:SGD.::GO:0045132; P:meiotic chromosome segregation; IMP:SGD.::GO:0043111; P:replication fork arrest; IMP:SGD.::GO:0048478; P:replication fork protection; IMP:SGD.
2Q6FU57    309   CSM3_CANGA Chromosome segregation in meiosis ...1581e-45     162     55     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
3Q6CIH2    299   CSM3_KLULA Chromosome segregation in meiosis ...1611e-43     157     52     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
4Q75DC6    240   CSM3_ASHGO Chromosome segregation in meiosis ...1736e-41     148     47     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
5A3LW29    352   CSM3_PICST Chromosome segregation in meiosis ...1973e-18     87.4     32     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
6Q0CU66    302   CSM3_ASPTN Chromosome segregation in meiosis ...2140.00000000000002     75.5     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
7A1D9E6    270   CSM3_NEOFI Chromosome segregation in meiosis ...2370.00000000000005     73.9     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
8Q7SHE8    409   CSM3_NEUCR Chromosome segregation in meiosis ...2030.0000000000001     74.3     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
9Q0UJ25    244   CSM3_PHANO Chromosome segregation in meiosis ...1310.0000000000002     72     33     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
10A4DA84    270   CSM3_ASPFU Chromosome segregation in meiosis ...1120.0000000000003     71.6     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
11Q59X26    316   CSM3_CANAL Chromosome segregation in meiosis ...1140.000000000002     70.5     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
12Q1DME8    416   CSM3_COCIM Chromosome segregation in meiosis ...760.000000000003     70.5     37     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
13A4RCW0    357   CSM3_MAGO7 Chromosome segregation in meiosis ...780.000000000007     68.9     40     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
14A5DDH8    210   CSM3_PICGU Chromosome segregation in meiosis ...1610.00000000001     66.6     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
15A5DWY0    350   CSM3_LODEL Chromosome segregation in meiosis ...1540.0000000003     64.3     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
16A1C8Y9    267   CSM3_ASPCL Chromosome segregation in meiosis ...760.0000000004     62.8     32     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
17Q2H3R6    431   CSM3_CHAGB Chromosome segregation in meiosis ...740.000000002     61.6     38     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
18Q6C656    368   CSM3_YARLI Chromosome segregation in meiosis ...960.000000008     60.1     28     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IEA:InterPro.
19Q3ZCC4    290   TIPIN_BOVIN TIMELESS-interacting protein OS=B...960.00000002     58.2     32     57GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
20O14350    181   SWI3_SCHPO Swi1-interacting protein swi3 OS=S...790.0000002     53.9     29     57GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0031298; C:replication fork protection complex; TAS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0071515; P:genetic imprinting at mating-type locus; IMP:PomBase.::GO:0043111; P:replication fork arrest; IC:PomBase.::GO:0048478; P:replication fork protection; IDA:UniProtKB.::GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.
21Q4QR88    276   TIPIN_RAT TIMELESS-interacting protein OS=Rat...1190.0000005     53.9     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
22Q91WA1    278   TIPIN_MOUSE TIMELESS-interacting protein OS=M...1190.0000006     53.5     29     51GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.::GO:0009411; P:response to UV; IMP:MGI.
23Q9BVW5    301   TIPIN_HUMAN TIMELESS-interacting protein OS=H...960.0000007     53.5     31     56GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0000790; C:nuclear chromatin; IDA:HGNC.
GO:0005515; F:protein binding; IPI:HGNC.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; IMP:HGNC.::GO:0031573; P:intra-S DNA damage checkpoint; IMP:HGNC.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; IMP:HGNC.::GO:0033262; P:regulation of DNA replication involved in S phase; TAS:HGNC.::GO:0048478; P:replication fork protection; IEA:InterPro.
24Q0IHI4    360   TIPIN_XENLA TIMELESS-interacting protein OS=X...880.0000007     53.9     32     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
25Q5F416    283   TIPIN_CHICK TIMELESS-interacting protein OS=G...1070.0000008     53.1     29     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
26Q6DBR4    294   TIPIN_DANRE TIMELESS-interacting protein OS=D...800.0000009     53.1     33     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
27Q61XH2    239   TIPIN_CAEBR Protein TIPIN homolog OS=Caenorha...1070.00002     48.9     26     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
28Q9TXI0    233   TIPIN_CAEEL Protein TIPIN homolog OS=Caenorha...1240.00002     48.9     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
29Q8INX3    307   TIPIN_DROME Protein TIPIN homolog OS=Drosophi...1080.0001     46.2     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; ISS:UniProtKB.::GO:0031573; P:intra-S DNA damage checkpoint; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0033261; P:regulation of S phase; ISS:UniProtKB.::GO:0048478; P:replication fork protection; IEA:InterPro.
30B3EUD6    103   RL21_AMOA5 50S ribosomal protein L21 OS=Amoeb...602.1     32     37     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
31Q9CLI9    582   PRIM_PASMU DNA primase OS=Pasteurella multoci...1033.5     33.1     24     44GO:0005658; C:alpha DNA polymerase:primase complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003896; F:DNA primase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:UniProtKB-KW.
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