Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR047C
Length:
1113
Number of sequences:
5887
Description:
YMR047C NUP116 SGDID:S000004650, Chr XIII from 366705-363364, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the Nup82 subcomplex of the nuclear pore complex; localized to both sides of the pore; contains a repetitive GLFG motif that interacts with mRNA export factor Mex67p and with karyopherin Kap95p; homologous to Nup100p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02630    1113   NU116_YEAST Nucleoporin NUP116/NSP116 OS=Sacc...11130     2166     100     100GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
2Q02629    959   NU100_YEAST Nucleoporin NUP100/NSP100 OS=Sacc...8763e-110     373     35     51GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
3Q9UTK4    1778   NU189_SCHPO Nucleoporin nup189 OS=Schizosacch...3350.0002     49.7     34     43GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0031080; C:Nup107-160 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006997; P:nucleus organization; IMP:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
4P52948    1817   NUP98_HUMAN Nuclear pore complex protein Nup9...4230.00000000000001     82.8     33     40GO:0005829; C:cytosol; TAS:Reactome.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:ProtInc.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017056; F:structural constituent of nuclear pore; NAS:UniProtKB.::GO:0005215; F:transporter activity; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006260; P:DNA replication; IMP:UniProtKB.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; NAS:UniProtKB.::GO:0000059; P:protein import into nucleus, docking; NAS:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
5Q54EQ8    2053   NUP98_DICDI Nuclear pore complex protein Nup9...1580.00000008     60.8     27     44GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:dictyBase.
GO:0005215; F:transporter activity; ISS:dictyBase.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; ISS:dictyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
6G5EEH9    1678   NUP98_CAEEL Nuclear pore complex protein Nup9...1230.00000004     61.6     28     48GO:0005643; C:nuclear pore; IEA:InterPro.::GO:0043186; C:P granule; IDA:WormBase.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040039; P:inductive cell migration; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0006810; P:transport; IEA:InterPro.
7P49687    1317   NU145_YEAST Nucleoporin NUP145 OS=Saccharomyc...2520.000002     56.2     33     43GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; IDA:SGD.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0050000; P:chromosome localization; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0034398; P:telomere tethering at nuclear periphery; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
8P49793    1816   NUP98_RAT Nuclear pore complex protein Nup98-...4490.000000000000005     84.3     33     41GO:0005654; C:nucleoplasm; IDA:RGD.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0042277; F:peptide binding; IDA:RGD.::GO:0005515; F:protein binding; IPI:RGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; IMP:RGD.
9Q16992    514   LWA_ANTEL LWamide neuropeptides OS=Anthopleur...4490.000000000006     73.2     28     45GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0007218; P:neuropeptide signaling pathway; IEA:UniProtKB-KW.
10Q02199    472   NUP49_YEAST Nucleoporin NUP49/NSP49 OS=Saccha...1262.6     35.8     36     50GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
11P48837    541   NUP57_YEAST Nucleoporin NUP57 OS=Saccharomyce...2000.0003     48.1     39     46GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.
12Q09793    425   NUP45_SCHPO Nucleoporin nup45 OS=Schizosaccha...2141.6     36.2     33     42GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; TAS:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
13Q01133    334   FMRA_CALPA Antho-RFamide neuropeptides OS=Cal...2060.024     42     25     44GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0007218; P:neuropeptide signaling pathway; IEA:UniProtKB-KW.
14Q10168    598   NSP1_SCHPO Nucleoporin nsp1 OS=Schizosaccharo...1020.11     40     42     57GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; IDA:PomBase.
GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
GO:0000917; P:barrier septum assembly; IEA:UniProtKB-KW.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
15Q80U93    2085   NU214_MOUSE Nuclear pore complex protein Nup2...2489.1     34.3     32     41GO:0005643; C:nuclear pore; TAS:MGI.
GO:0005487; F:nucleocytoplasmic transporter activity; IMP:MGI.
GO:0006406; P:mRNA export from nucleus; IMP:MGI.::GO:0006606; P:protein import into nucleus; IMP:MGI.::GO:0051726; P:regulation of cell cycle; IMP:MGI.
16Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...1665.3     35     33     39GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
17A9KK96    187   ATPF_CLOPH ATP synthase subunit b OS=Clostrid...1183.4     34.3     27     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.
GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro.
GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
18B1IGZ5    336   PRSA_CLOBK Foldase protein prsA OS=Clostridiu...2003.5     35     26     42GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
19C1FNE4    336   PRSA_CLOBJ Foldase protein prsA OS=Clostridiu...1954     34.7     27     42GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
20C3KW94    336   PRSA_CLOB6 Foldase protein prsA OS=Clostridiu...1625.4     34.3     28     43GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
21Q9CMM8    351   SELD_PASMU Selenide, water dikinase OS=Pasteu...657.2     33.9     34     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004756; F:selenide, water dikinase activity; IEA:EC.
22Q6PCS4    1337   RHG29_DANRE Rho GTPase-activating protein 29 ...1567.5     34.3     26     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
records
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