Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR046C
Length:
440
Number of sequences:
5887
Description:
YMR046C YMR046C SGDID:S000004649, Chr XIII from 362627-361305, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q6LPQ6    466   SYN_PHOPR Asparagine--tRNA ligase OS=Photobac...1000.97     35.4     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004816; F:asparagine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006421; P:asparaginyl-tRNA aminoacylation; IEA:InterPro.
92Q8IXK0    858   PHC2_HUMAN Polyhomeotic-like protein 2 OS=Hom...1361.1     35.4     24     43GO:0035102; C:PRC1 complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
93A1IGU4    676   ARH37_MOUSE Rho guanine nucleotide exchange f...601.8     34.7     35     58GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.
GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.
94Q9WJB2    3960   RPOA_PRRSR Replicase polyprotein 1ab OS=(PRRS...1302     34.7     25     37GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
95P14345    86   ICP47_HHV2H ICP47 protein OS=2). GN=US12 ...672.1     32     30     42GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.
96Q838R5    578   EZRA_ENTFA Septation ring formation regulator...664     33.5     32     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0005940; C:septin ring; IEA:InterPro.
GO:0000917; P:barrier septum assembly; IEA:UniProtKB-KW.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000921; P:septin ring assembly; IEA:InterPro.
97Q9VT65    925   CANB_DROME Calpain-B OS=Drosophila melanogast...1124.3     33.5     26     38GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005509; F:calcium ion binding; NAS:UniProtKB.::GO:0004198; F:calcium-dependent cysteine-type endopeptidase activity; IDA:UniProtKB.
GO:0016540; P:protein autoprocessing; TAS:FlyBase.::GO:0006508; P:proteolysis; IDA:UniProtKB.
98P46973    164   HIT1_YEAST Protein HIT1 OS=Saccharomyces cere...564.3     32.3     36     52GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
99Q9LXA9    315   BH061_ARATH Transcription factor bHLH61 OS=Ar...475.5     32.7     40     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
100P38483    229   ABEC1_RAT C->U-editing enzyme APOBEC-1 OS=Rat...916.3     32.3     24     38GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0004126; F:cytidine deaminase activity; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0032869; P:cellular response to insulin stimulus; IEP:RGD.::GO:0016554; P:cytidine to uridine editing; IDA:RGD.::GO:0051607; P:defense response to virus; IDA:RGD.::GO:0080111; P:DNA demethylation; ISS:UniProtKB.::GO:0016556; P:mRNA modification; IDA:RGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0090310; P:negative regulation of methylation-dependent chromatin silencing; ISS:UniProtKB.::GO:0051592; P:response to calcium ion; IDA:RGD.::GO:0042493; P:response to drug; IDA:RGD.::GO:0045471; P:response to ethanol; IDA:RGD.::GO:0006970; P:response to osmotic stress; IDA:RGD.::GO:0010043; P:response to zinc ion; IEP:RGD.
101P39061    1774   COIA1_MOUSE Collagen alpha-1(XVIII) chain OS=...607.3     32.7     33     50GO:0005604; C:basement membrane; IDA:MGI.::GO:0005581; C:collagen; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0001525; P:angiogenesis; IDA:MGI.::GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0001886; P:endothelial cell morphogenesis; IDA:MGI.::GO:0030198; P:extracellular matrix organization; IMP:MGI.::GO:0043065; P:positive regulation of apoptotic process; IDA:MGI.::GO:0030335; P:positive regulation of cell migration; IDA:MGI.::GO:0008284; P:positive regulation of cell proliferation; IDA:MGI.
102B4P184    115   VTU4_DROYA Vitelline membrane protein Vm32E O...478.1     30.8     40     49GO:0005615; C:extracellular space; ISS:UniProtKB.
GO:0008316; F:structural constituent of vitelline membrane; ISS:UniProtKB.
GO:0007305; P:vitelline membrane formation involved in chorion-containing eggshell formation; ISS:UniProtKB.
103Q5TB30    811   DEP1A_HUMAN DEP domain-containing protein 1A ...1189.7     32.3     27     38GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 103 91 - 103
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::