Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR044W
Length:
475
Number of sequences:
5887
Description:
YMR044W IOC4 SGDID:S000004647, Chr XIII from 355384-356811, Genome Release 64-1-1, Verified ORF, "Member of a complex (Isw1b) with Isw1p and Ioc2p that exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing, contains a PWWP motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q04213    475   IOC4_YEAST ISWI one complex protein 4 OS=Sacc...4750     964     100     100GO:0016587; C:ISW1 complex; IPI:SGD.
GO:0006200; P:ATP catabolic process; IDA:GOC.::GO:0006338; P:chromatin remodeling; IPI:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2O59676    359   PDP1_SCHPO PWWP domain-containing protein 1 O...1020.008     42     28     46GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0035064; F:methylated histone residue binding; IPI:PomBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000077; P:DNA damage checkpoint; IGI:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0034502; P:protein localization to chromosome; IGI:PomBase.::GO:0070510; P:regulation of histone H4-K20 methylation; IMP:PomBase.
3O94312    568   PDP2_SCHPO PWWP domain-containing protein2 OS...480.35     37     38     52GO:0005634; C:nucleus; IDA:PomBase.
GO:0035064; F:methylated histone residue binding; ISS:PomBase.
GO:0034770; P:histone H4-K20 methylation; ISS:PomBase.
4Q5XXA7    662   HDGR2_DANRE Hepatoma-derived growth factor-re...390.39     37     41     59GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
5Q8T079    602   GLYR1_DROME Putative oxidoreductase GLYR1 hom...230.42     37     52     83
GO:0050662; F:coenzyme binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0004616; F:phosphogluconate dehydrogenase (decarboxylating) activity; IEA:InterPro.
GO:0006098; P:pentose-phosphate shunt; IEA:InterPro.
6Q66T72    530   PSIP1_FELCA PC4 and SFRS1-interacting protein...330.43     37     39     67GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0033613; F:activating transcription factor binding; ISS:UniProtKB.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB.::GO:0097100; F:supercoiled DNA binding; ISS:UniProtKB.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB.::GO:0009408; P:response to heat; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.
7Q29NG1    612   GLYR1_DROPS Putative oxidoreductase GLYR1 hom...230.43     37     52     83
GO:0050662; F:coenzyme binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0004616; F:phosphogluconate dehydrogenase (decarboxylating) activity; IEA:InterPro.
GO:0006098; P:pentose-phosphate shunt; IEA:InterPro.
8Q8MJG1    530   PSIP1_BOVIN PC4 and SFRS1-interacting protein...330.48     36.6     39     67GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0033613; F:activating transcription factor binding; ISS:UniProtKB.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB.::GO:0097100; F:supercoiled DNA binding; ISS:UniProtKB.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB.::GO:0009408; P:response to heat; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.
9Q812D1    528   PSIP1_RAT PC4 and SFRS1-interacting protein O...330.52     36.6     39     67GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.::GO:0034399; C:nuclear periphery; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:UniProtKB.
GO:0033613; F:activating transcription factor binding; ISS:UniProtKB.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB.::GO:0097100; F:supercoiled DNA binding; IDA:UniProtKB.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB.::GO:0009408; P:response to heat; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.
10Q5XXA9    579   PSIP1_CHICK Lens epithelium-derived growth fa...330.53     36.6     39     67GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0033613; F:activating transcription factor binding; ISS:UniProtKB.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB.::GO:0097100; F:supercoiled DNA binding; ISS:UniProtKB.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB.::GO:0009408; P:response to heat; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.
11O75475    530   PSIP1_HUMAN PC4 and SFRS1-interacting protein...330.53     36.6     39     67GO:0005829; C:cytosol; TAS:Reactome.::GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.::GO:0034399; C:nuclear periphery; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0033613; F:activating transcription factor binding; IDA:UniProtKB.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:UniProtKB.::GO:0097100; F:supercoiled DNA binding; ISS:UniProtKB.
GO:0019059; P:initiation of viral infection; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0019047; P:provirus integration; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0009408; P:response to heat; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q99JF8    528   PSIP1_MOUSE PC4 and SFRS1-interacting protein...330.54     36.6     39     67GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.::GO:0034399; C:nuclear periphery; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0033613; F:activating transcription factor binding; ISS:UniProtKB.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB.::GO:0097100; F:supercoiled DNA binding; ISS:UniProtKB.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB.::GO:0009408; P:response to heat; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.
13Q3UMU9    669   HDGR2_MOUSE Hepatoma-derived growth factor-re...370.63     36.2     43     59GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
14Q7Z4V5    671   HDGR2_HUMAN Hepatoma-derived growth factor-re...370.64     36.2     43     59GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
15Q925G1    669   HDGR2_RAT Hepatoma-derived growth factor-rela...370.66     36.2     43     59GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
16O95153    1857   RIMB1_HUMAN Peripheral-type benzodiazepine re...741.3     35.4     26     51GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO:0030156; F:benzodiazepine receptor binding; IPI:UniProtKB.
17Q9C5X4    1062   ATX1_ARATH Histone-lysine N-methyltransferase...271.7     35     48     70GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0018024; F:histone-lysine N-methyltransferase activity; IDA:TAIR.::GO:0010314; F:phosphatidylinositol-5-phosphate binding; IDA:TAIR.::GO:0044212; F:transcription regulatory region DNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051568; P:histone H3-K4 methylation; IDA:TAIR.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0009909; P:regulation of flower development; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0010093; P:specification of floral organ identity; IMP:TAIR.
18Q5I125    163   IKBN3_MDBVW I-Kappa-B like protein N3 OS=Micr...631.7     33.9     30     48
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
19Q8MT36    1427   MES4_DROME Probable histone-lysine N-methyltr...291.8     35     52     66GO:0000228; C:nuclear chromosome; ISS:UniProtKB.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016458; P:gene silencing; ISS:UniProtKB.::GO:0018992; P:germ-line sex determination; ISS:UniProtKB.
20P0CB22    1083   ATX2_ARATH Histone-lysine N-methyltransferase...273.4     33.9     44     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0042800; F:histone methyltransferase activity (H3-K4 specific); IMP:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IMP:TAIR.
21P20323    535   VHTJ_BPT3 Head-to-tail joining protein OS=Ent...764.1     33.5     30     49GO:0019012; C:virion; IEA:UniProtKB-SubCell.
22Q9P2R6    1566   RERE_HUMAN Arginine-glutamic acid dipeptide r...854.7     33.5     26     49GO:0005739; C:mitochondrion; IDA:HPA.
GO:0008267; F:poly-glutamine tract binding; TAS:ProtInc.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q5YCC7    1138   TMC3_CHICK Transmembrane channel-like protein...904.9     33.5     36     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
24P45386    1849   IGA4_HAEIF Immunoglobulin A1 protease autotra...1315.5     33.5     24     40GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
25P09790    1532   IGA_NEIGO IgA-specific serine endopeptidase a...1467     33.1     21     45GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
26B4PLB3    354   WRNXO_DROYA Werner Syndrome-like exonuclease ...817.8     32.7     33     53GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0008408; F:3'-5' exonuclease activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0045950; P:negative regulation of mitotic recombination; ISS:UniProtKB.
27Q80TZ9    1558   RERE_MOUSE Arginine-glutamic acid dipeptide r...858.4     32.7     26     47GO:0000118; C:histone deacetylase complex; IPI:MGI.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IPI:MGI.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 27 1 - 27
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::