rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P54000 | 292 | SUB1_YEAST RNA polymerase II transcriptional ... | 292 | 0 | 582 | 100 | 100 | GO:0005634; C:nucleus; IC:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IPI:SGD. | | | | | | | | | | GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:SGD.::GO:0045945; P:positive regulation of transcription from RNA polymerase III promoter; IMP:SGD.::GO:0043618; P:regulation of transcription from RNA polymerase II promoter in response to stress; IDA:SGD.::GO:0070898; P:RNA polymerase III transcriptional preinitiation complex assembly; IDA:SGD.::GO:0006369; P:termination of RNA polymerase II transcription; IGI:SGD. | 2 | P11031 | 127 | TCP4_MOUSE Activated RNA polymerase II transc... | 68 | 0.00000000000006 | 70.9 | 50 | 74 | | | | | | | | | | | | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | Q63396 | 127 | TCP4_RAT Activated RNA polymerase II transcri... | 68 | 0.00000000000008 | 70.5 | 50 | 74 | | | | | | | | | | | | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | Q5ZK63 | 126 | TCP4_CHICK Activated RNA polymerase II transc... | 66 | 0.0000000000001 | 69.7 | 48 | 74 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | Q5R6D0 | 127 | TCP4_PONAB Activated RNA polymerase II transc... | 68 | 0.0000000000004 | 68.6 | 49 | 72 | | | | | | | | | | | | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | Q4R947 | 127 | TCP4_MACFA Activated RNA polymerase II transc... | 68 | 0.0000000000004 | 68.6 | 49 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | P53999 | 127 | TCP4_HUMAN Activated RNA polymerase II transc... | 68 | 0.0000000000004 | 68.6 | 49 | 72 | GO:0005730; C:nucleolus; IDA:HPA.::GO:0005667; C:transcription factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB. | | | | | | | | | | GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 8 | Q872F4 | 172 | TCP4_NEUCR Putative RNA polymerase II transcr... | 69 | 0.000000001 | 59.7 | 42 | 62 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 9 | O65154 | 107 | KIWI_ARATH RNA polymerase II transcriptional ... | 67 | 0.00000001 | 56.2 | 42 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 10 | Q94045 | 124 | TCP4_CAEEL Putative RNA polymerase II transcr... | 45 | 0.00003 | 46.2 | 40 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 11 | P87294 | 136 | TCP4_SCHPO Putative RNA polymerase II transcr... | 113 | 0.00008 | 45.1 | 34 | 50 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:PomBase.::GO:0003697; F:single-stranded DNA binding; IDA:PomBase.::GO:0003713; F:transcription coactivator activity; IDA:PomBase. | | | | | | | | | | GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IDA:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 12 | O65155 | 165 | KELP_ARATH RNA polymerase II transcriptional ... | 69 | 0.0005 | 43.5 | 35 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 13 | Q9VLR5 | 110 | TCP4_DROME RNA polymerase II transcriptional ... | 46 | 0.004 | 40 | 41 | 65 | GO:0005634; C:nucleus; IDA:FlyBase. | | | | | | | | | | GO:0003697; F:single-stranded DNA binding; IDA:FlyBase.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 14 | P07293 | 1873 | CAC1S_RABIT Voltage-dependent L-type calcium ... | 70 | 0.51 | 35.8 | 33 | 53 | GO:0005891; C:voltage-gated calcium channel complex; IEA:InterPro. | | | | | | | | | | GO:0005245; F:voltage-gated calcium channel activity; IEA:InterPro. | | | | | | | | | | | 15 | Q13698 | 1873 | CAC1S_HUMAN Voltage-dependent L-type calcium ... | 73 | 0.56 | 35.8 | 32 | 52 | GO:0031674; C:I band; IDA:UniProtKB.::GO:0030315; C:T-tubule; IDA:UniProtKB.::GO:0005891; C:voltage-gated calcium channel complex; IDA:UniProtKB. | | | | | | | | | | GO:0008331; F:high voltage-gated calcium channel activity; IDA:UniProtKB. | | | | | | | | | | GO:0007411; P:axon guidance; TAS:Reactome. | 16 | P03186 | 3149 | DEN_EBVB9 Deneddylase BPLF1 OS=Epstein-Barr v... | 109 | 1.4 | 34.3 | 24 | 52 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019033; C:viral tegument; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW. | 17 | Q6GH60 | 1009 | SBCC_STAAR Nuclease sbcCD subunit C OS=Staphy... | 88 | 2.9 | 33.1 | 30 | 53 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 18 | Q9C0J8 | 1336 | WDR33_HUMAN pre-mRNA 3' end processing protei... | 162 | 3.6 | 33.1 | 27 | 43 | GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; NAS:UniProtKB. | 19 | Q8K4P0 | 1330 | WDR33_MOUSE pre-mRNA 3' end processing protei... | 162 | 4.9 | 32.7 | 25 | 42 | GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 20 | B3EGW3 | 328 | RPOA_CHLL2 DNA-directed RNA polymerase subuni... | 62 | 7.2 | 31.6 | 37 | 45 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro. | | | | | | | | | | | 21 | A1BJ07 | 327 | RPOA_CHLPD DNA-directed RNA polymerase subuni... | 62 | 8.9 | 31.6 | 37 | 45 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro. | | | | | | | | | | | 22 | Q8U1I5 | 78 | Y1222_PYRFU Putative antitoxin PF1222 OS=Pyro... | 54 | 9.6 | 29.3 | 33 | 63 | | | | | | | | | | | | | | | | | | | | | |