Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR026C
Length:
399
Number of sequences:
5887
Description:
YMR026C PEX12 SGDID:S000004628, Chr XIII from 325435-324236, Genome Release 64-1-1, reverse complement, Verified ORF, "C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, required for peroxisome biogenesis and peroxisomal matrix protein import; forms translocation subcomplex with Pex2p and Pex10p; mutations in human homolog cause peroxisomal disorder"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q04370    399   PEX12_YEAST Peroxisome assembly protein 12 OS...3990     825     100     100GO:0005779; C:integral to peroxisomal membrane; IDA:SGD.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016558; P:protein import into peroxisome matrix; IMP:SGD.
2Q01961    409   PEX12_PICPA Peroxisome assembly protein 12 OS...4313e-62     211     32     52GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006625; P:protein targeting to peroxisome; IEA:InterPro.
3C8VCP8    489   PEX12_EMENI Peroxisome assembly protein 12 OS...4111e-20     97.1     25     39GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006625; P:protein targeting to peroxisome; IEA:InterPro.
4Q8TFH8    343   PEX12_SCHPO Peroxisome assembly protein 12 OS...3589e-17     84.3     24     44GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006625; P:protein targeting to peroxisome; IEA:InterPro.
5O00623    359   PEX12_HUMAN Peroxisome assembly protein 12 OS...3480.000000000000001     81.3     24     45GO:0005779; C:integral to peroxisomal membrane; IDA:UniProtKB.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IMP:UniProtKB.
GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
6Q8VC48    359   PEX12_MOUSE Peroxisome assembly protein 12 OS...3500.000000000000006     79.3     24     45
7A4FUD4    359   PEX12_BOVIN Peroxisome assembly protein 12 OS...3520.000000000000008     79     24     44
GO:0008270; F:zinc ion binding; ISS:UniProtKB.
8Q9ET67    359   PEX12_CRILO Peroxisome assembly protein 12 OS...3590.000000000000009     78.6     25     44GO:0005779; C:integral to peroxisomal membrane; ISS:UniProtKB.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0016558; P:protein import into peroxisome matrix; ISS:UniProtKB.
9O88177    359   PEX12_RAT Peroxisome assembly protein 12 OS=R...3650.0000000000001     75.1     24     46
10Q19189    359   PEX12_CAEEL Putative peroxisome assembly prot...3660.000000000008     69.7     21     45GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006625; P:protein targeting to peroxisome; IEA:InterPro.
11Q9M841    393   PEX12_ARATH Peroxisome biogenesis protein 12 ...4000.00000000001     69.7     26     41GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048598; P:embryonic morphogenesis; IMP:TAIR.::GO:0006635; P:fatty acid beta-oxidation; IMP:TAIR.::GO:0016558; P:protein import into peroxisome matrix; IDA:TAIR.
12Q54N40    459   PEX12_DICDI Putative peroxisome assembly prot...1950.00000005     58.2     24     42GO:0005779; C:integral to peroxisomal membrane; ISS:dictyBase.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; ISS:dictyBase.
13Q9VPT5    297   PEX12_DROME Putative peroxisome assembly prot...1030.000004     52     28     48GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008022; F:protein C-terminus binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006625; P:protein targeting to peroxisome; IEA:InterPro.::GO:0007286; P:spermatid development; IMP:FlyBase.::GO:0048137; P:spermatocyte division; IMP:FlyBase.
14Q9P3U8    468   YJ95_SCHPO Uncharacterized RING finger protei...430.29     37     33     56GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
15P21183    415   IL5RA_MOUSE Interleukin-5 receptor subunit al...1090.92     35.4     23     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004896; F:cytokine receptor activity; IEA:InterPro.
GO:0002437; P:inflammatory response to antigenic stimulus; IMP:MGI.::GO:0032674; P:regulation of interleukin-5 production; IMP:MGI.
16Q8AVN9    524   ZN346_XENLA Zinc finger protein 346 OS=Xenopu...490.96     35.4     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003725; F:double-stranded RNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
17Q95216    1005   HLTF_RABIT Helicase-like transcription factor...521.3     35     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q69ZS0    1063   PZRN3_MOUSE E3 ubiquitin-protein ligase PDZRN...381.8     34.7     34     55GO:0031594; C:neuromuscular junction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007528; P:neuromuscular junction development; IMP:UniProtKB.
19Q9UPQ7    1066   PZRN3_HUMAN E3 ubiquitin-protein ligase PDZRN...381.8     34.7     34     55
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
20P43254    675   COP1_ARATH E3 ubiquitin-protein ligase COP1 O...431.9     34.3     30     58GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000152; C:nuclear ubiquitin ligase complex; TAS:TAIR.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046283; P:anthocyanin metabolic process; IMP:TAIR.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009649; P:entrainment of circadian clock; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IGI:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0009641; P:shade avoidance; IMP:TAIR.::GO:0009647; P:skotomorphogenesis; TAS:TAIR.
21P68907    1062   PZRN3_RAT E3 ubiquitin-protein ligase PDZRN3 ...372.4     34.3     35     57
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
22Q7S304    707   BRE1_NEUCR E3 ubiquitin-protein ligase bre-1 ...413.2     33.9     34     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
23Q5M7Z0    435   RNFT1_HUMAN RING finger and transmembrane dom...763.4     33.5     24     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
24Q86XT4    487   TRI50_HUMAN E3 ubiquitin-protein ligase TRIM5...643.6     33.5     25     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
25P93471    672   COP1_PEA E3 ubiquitin-protein ligase COP1 OS=...434     33.5     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
26Q75EN0    443   RAD18_ASHGO Postreplication repair E3 ubiquit...385     33.1     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
27Q9DCN7    395   RNFT1_MOUSE RING finger and transmembrane dom...785.3     32.7     27     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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