Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR005W
Length:
388
Number of sequences:
5887
Description:
YMR005W TAF4 SGDID:S000004607, Chr XIII from 276045-277211, Genome Release 64-1-1, Verified ORF, "TFIID subunit (48 kDa), involved in RNA polymerase II transcription initiation; potential Cdc28p substrate"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P50105    388   TAF4_YEAST Transcription initiation factor TF...3880     795     100     100GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0001102; F:RNA polymerase II activating transcription factor binding; IDA:SGD.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IC:SGD.
2A6ZM67    388   TAF4_YEAS7 Transcription initiation factor TF...3880     793     99     99GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
3Q6FNH1    336   TAF4_CANGA Transcription initiation factor TF...3002e-149     433     72     84GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
4A7TJV5    421   TAF4_VANPO Transcription initiation factor TF...3874e-137     405     57     73GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
5Q75CC5    361   TAF4_ASHGO Transcription initiation factor TF...2544e-104     318     61     78GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
6Q6CUC6    366   TAF4_KLULA Transcription initiation factor TF...3169e-103     315     52     72GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
7A5DAX7    455   TAF4_PICGU Transcription initiation factor TF...2881e-47     173     36     57GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
8A5DYN3    550   TAF4_LODEL Transcription initiation factor TF...3244e-42     160     35     54GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
9Q59U67    363   TAF4_CANAL Transcription initiation factor TF...2859e-42     155     35     57GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
10Q6BKB1    522   TAF4_DEBHA Transcription initiation factor TF...2951e-41     158     36     54GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
11Q9P7S4    365   TAF4_SCHPO Transcription initiation factor TF...3130.0000004     55.1     23     40GO:0000785; C:chromatin; NAS:PomBase.::GO:0005669; C:transcription factor TFIID complex; ISS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; ISS:PomBase.
12Q12060    488   HFI1_YEAST Transcriptional coactivator HFI1/A...550.55     35.8     31     56GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IPI:SGD.::GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.
GO:0003713; F:transcription coactivator activity; IMP:SGD.
GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.
13O43143    795   DHX15_HUMAN Putative pre-mRNA-splicing factor...512.6     33.9     43     53GO:0005689; C:U12-type spliceosomal complex; IDA:HGNC.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003724; F:RNA helicase activity; TAS:ProtInc.
GO:0006397; P:mRNA processing; TAS:ProtInc.::GO:0008380; P:RNA splicing; IC:HGNC.
14Q5RAZ4    795   DHX15_PONAB Putative pre-mRNA-splicing factor...513.3     33.5     43     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15O35286    795   DHX15_MOUSE Putative pre-mRNA-splicing factor...515.8     32.7     41     53GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
16Q7V226    300   HSLO_PROMP 33 kDa chaperonin OS=Prochlorococc...1326.6     32.3     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
records
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