Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML128C
Length:
513
Number of sequences:
5887
Description:
YML128C MSC1 SGDID:S000004597, Chr XIII from 16676-15135, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function; mutant is defective in directing meiotic recombination events to homologous chromatids; the authentic, non-tagged protein is detected in highly purified mitochondria and is phosphorylated"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03104    513   MSC1_YEAST Meiotic sister chromatid recombina...5130     1026     100     100GO:0005783; C:endoplasmic reticulum; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0001950; C:plasma membrane enriched fraction; IDA:SGD.
GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
2Q9Y7X6    684   ISH1_SCHPO Stress response protein ish1 OS=Sc...3970.94     35.8     20     36GO:0005783; C:endoplasmic reticulum; IDA:PomBase.::GO:0031965; C:nuclear membrane; TAS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0033554; P:cellular response to stress; IMP:PomBase.
3A1UU47    209   RIMP_BARBK Ribosome maturation factor RimP OS...700.2     37     26     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
4Q2HJG5    796   VPS35_BOVIN Vacuolar protein sorting-associat...570.6     36.6     30     54GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5Q96QK1    796   VPS35_HUMAN Vacuolar protein sorting-associat...570.63     36.6     30     54GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005768; C:endosome; IDA:LIFEdb.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0042147; P:retrograde transport, endosome to Golgi; NAS:UniProtKB.
6Q9EQH3    796   VPS35_MOUSE Vacuolar protein sorting-associat...570.64     36.6     30     54GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
7Q7T3T4    417   SMS1_CHICK Phosphatidylcholine:ceramide choli...800.85     35.8     26     54GO:0030173; C:integral to Golgi membrane; ISS:AgBase.
GO:0047493; F:ceramide cholinephosphotransferase activity; ISS:AgBase.::GO:0016301; F:kinase activity; IEA:UniProtKB-KW.::GO:0033188; F:sphingomyelin synthase activity; ISS:HGNC.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0016049; P:cell growth; ISS:HGNC.::GO:0006954; P:inflammatory response; ISS:AgBase.::GO:0043066; P:negative regulation of apoptotic process; ISS:AgBase.::GO:0006686; P:sphingomyelin biosynthetic process; ISS:AgBase.
8P29398    1263   RPOB_THEMA DNA-directed RNA polymerase subuni...681.4     35.4     32     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
9B1L935    1263   RPOB_THESQ DNA-directed RNA polymerase subuni...681.5     35.4     32     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
10A5IJW3    1263   RPOB_THEP1 DNA-directed RNA polymerase subuni...681.5     35.4     32     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
11Q8YRP3    679   SPEA_NOSS1 Biosynthetic arginine decarboxylas...1832.1     34.7     25     39
GO:0008792; F:arginine decarboxylase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006527; P:arginine catabolic process; IEA:InterPro.::GO:0008295; P:spermidine biosynthetic process; IEA:UniProtKB-KW.
12Q7VJD2    147   RL9_HELHP 50S ribosomal protein L9 OS=Helicob...944.2     32.3     31     52GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
13Q83FA5    710   Y041_COXBU Uncharacterized protein CBU_0041 O...904.8     33.5     31     50
14Q51083    230   T2N3_NEILA Type-2 restriction enzyme NlaIII O...535.1     32.7     34     53
GO:0009036; F:Type II site-specific deoxyribonuclease activity; IEA:EC.
GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
15P10587    1979   MYH11_CHICK Myosin-11 OS=Gallus gallus (Chick...1418.9     33.1     28     47GO:0030016; C:myofibril; IEA:UniProtKB-SubCell.::GO:0032982; C:myosin filament; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0008307; F:structural constituent of muscle; ISS:UniProtKB.
GO:0048739; P:cardiac muscle fiber development; ISS:UniProtKB.::GO:0048251; P:elastic fiber assembly; ISS:UniProtKB.::GO:0030241; P:skeletal muscle myosin thick filament assembly; ISS:UniProtKB.::GO:0006939; P:smooth muscle contraction; ISS:UniProtKB.
records
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