Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML118W
Length:
505
Number of sequences:
5887
Description:
YML118W NGL3 SGDID:S000004587, Chr XIII from 32334-33851, Genome Release 64-1-1, Verified ORF, "Putative endonuclease, has a domain similar to a magnesium-dependent endonuclease motif in mRNA deadenylase Ccr4p; similar to Ngl1p and Ngl2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03210    505   NGL3_YEAST Probable RNA exonuclease NGL3 OS=S...5050     1056     100     100
GO:0004535; F:poly(A)-specific ribonuclease activity; IDA:SGD.
GO:0043633; P:polyadenylation-dependent RNA catabolic process; IDA:SGD.
2Q03264    515   NGL2_YEAST RNA exonuclease NGL2 OS=Saccharomy...4756e-129     392     42     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004521; F:endoribonuclease activity; IMP:SGD.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IMP:SGD.
3Q9Y7M8    502   YNTB_SCHPO Probable RNA exonuclease C9B6.11c ...4732e-75     253     34     52GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004521; F:endoribonuclease activity; ISS:PomBase.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; ISS:PomBase.
4Q08DF7    609   PDE12_BOVIN 2',5'-phosphodiesterase 12 OS=Bos...820.91     35.8     28     44
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
5Q6L8Q7    609   PDE12_HUMAN 2',5'-phosphodiesterase 12 OS=Hom...820.22     37.7     29     44
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
6Q6AXQ5    608   PDE12_RAT 2',5'-phosphodiesterase 12 OS=Rattu...970.13     38.5     27     40
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
7Q3TIU4    608   PDE12_MOUSE 2',5'-phosphodiesterase 12 OS=Mus...820.62     36.6     28     43GO:0005739; C:mitochondrion; IDA:MGI.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
8Q8VCU0    667   ANGE1_MOUSE Protein angel homolog 1 OS=Mus mu...2010.000000000001     74.3     28     50
9Q9UNK9    670   ANGE1_HUMAN Protein angel homolog 1 OS=Homo s...2010.000000000001     73.9     28     50
10Q5RGT6    569   ANGE2_DANRE Protein angel homolog 2 OS=Danio ...4030.000000000001     73.9     26     42
11B2RYM0    667   ANGE1_RAT Protein angel homolog 1 OS=Rattus n...2010.000000000001     73.9     28     50
12A8MS41    417   CCR4D_ARATH Carbon catabolite repressor prote...2280.000000000003     72     28     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q24239    354   ANGEL_DROME Protein angel OS=Drosophila melan...2030.000000000007     70.5     28     46
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
14Q8K1C0    544   ANGE2_MOUSE Protein angel homolog 2 OS=Mus mu...2440.00000000005     68.6     26     45
15Q8VYU4    754   CCR4F_ARATH Carbon catabolite repressor prote...2390.0000000009     64.7     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q9M2F8    603   CCR4B_ARATH Carbon catabolite repressor prote...3790.000000001     64.3     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17A6H7I3    544   ANGE2_BOVIN Protein angel homolog 2 OS=Bos ta...2440.000000001     64.3     26     44
18Q5VTE6    544   ANGE2_HUMAN Protein angel homolog 2 OS=Homo s...2190.000000002     63.2     26     45
19B7XK66    481   CCR4_ENTBH Probable glucose-repressible alcoh...1920.000000003     62.8     29     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20Q9LS39    448   CCR4C_ARATH Carbon catabolite repressor prote...3450.000000003     62.4     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21Q9UK39    431   NOCT_HUMAN Nocturnin OS=Homo sapiens (Human)....2120.000000005     62     28     44GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
22P79942    388   NOCT_XENLA Nocturnin OS=Xenopus laevis (Afric...2310.000000007     61.2     27     43
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
23Q9ET55    253   NOCT_RAT Nocturnin OS=Rattus norvegicus (Rat)...2070.000000009     59.7     28     44
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
24O35710    429   NOCT_MOUSE Nocturnin OS=Mus musculus (Mouse)....2400.00000001     60.8     26     43
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
25Q6CEJ6    705   CCR4_YARLI Glucose-repressible alcohol dehydr...1910.00000001     61.2     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
26Q6BMM5    831   CCR4_DEBHA Glucose-repressible alcohol dehydr...2210.00000004     59.7     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
27Q8W0Z9    602   CCR4A_ARATH Carbon catabolite repressor prote...2270.0000004     56.2     27     44GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q5A761    787   CCR4_CANAL Glucose-repressible alcohol dehydr...2300.0000005     55.8     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0009272; P:fungal-type cell wall biogenesis; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.::GO:0055091; P:phospholipid homeostasis; IMP:CGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
29C4V7I7    476   CCR4_NOSCE Probable glucose-repressible alcoh...2180.0000007     55.5     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
30Q0U7W4    597   CCR4_PHANO Glucose-repressible alcohol dehydr...3670.0000008     55.5     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31O74874    690   CCR4_SCHPO Glucose-repressible alcohol dehydr...3200.000002     54.3     23     42GO:0030015; C:CCR4-NOT core complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
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