Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML112W
Length:
296
Number of sequences:
5887
Description:
YML112W CTK3 SGDID:S000004580, Chr XIII from 45063-45953, Genome Release 64-1-1, Verified ORF, "Gamma subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P46963    296   CTK3_YEAST CTD kinase subunit gamma OS=Saccha...2960     607     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IPI:GOC.::GO:0031124; P:mRNA 3'-end processing; IC:SGD.::GO:0032786; P:positive regulation of transcription elongation, DNA-dependent; IDA:SGD.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0045903; P:positive regulation of translational fidelity; IPI:SGD.::GO:0006468; P:protein phosphorylation; IPI:SGD.::GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q9USJ8    218   CTK3_SCHPO CTD kinase subunit gamma OS=Schizo...601.2     33.9     35     48GO:0032806; C:carboxy-terminal domain protein kinase complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.
GO:0005509; F:calcium ion binding; NAS:PomBase.
GO:0002182; P:cytoplasmic translational elongation; NAS:PomBase.::GO:0031124; P:mRNA 3'-end processing; ISS:PomBase.::GO:0045903; P:positive regulation of translational fidelity; ISS:PomBase.::GO:0006468; P:protein phosphorylation; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3P10869    527   AK_YEAST Aspartokinase OS=Saccharomyces cerev...525.3     32.3     37     50GO:0005737; C:cytoplasm; IDA:SGD.
GO:0004072; F:aspartate kinase activity; IDA:SGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006555; P:methionine metabolic process; TAS:SGD.::GO:0009088; P:threonine biosynthetic process; IMP:SGD.
4A7EPT5    1023   XPOT_SCLS1 Exportin-T OS=mold) (Whetzelinia s...849.2     31.6     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
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