Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML107C
Length:
334
Number of sequences:
5887
Description:
YML107C PML39 SGDID:S000004575, Chr XIII from 56269-55265, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein required for nuclear retention of unspliced pre-mRNAs along with Mlp1p and Pml1p; anchored to nuclear pore complex via Mlp1p and Mlp2p; found with the subset of nuclear pores farthest from the nucleolus; may interact with ribosomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03760    334   PML39_YEAST Pre-mRNA leakage protein 39 OS=Sa...3340     690     100     100GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051237; P:maintenance of RNA location; IMP:SGD.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
2A2KF29    484   SMKTR_MOUSE Sperm motility kinase Tcr mutant ...550.15     37.4     29     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004713; F:protein tyrosine kinase activity; IEA:UniProtKB-KW.
3Q96LR7    162   CB050_HUMAN Uncharacterized protein C2orf50 O...481.6     33.5     38     48
4Q03W29    143   MRAZ_LEUMM Protein MraZ OS=NCDO 523). GN=mraZ...312.8     32.3     48     74
5Q8S9G8    801   SPL7_ARATH Squamosa promoter-binding-like pro...1183.1     33.5     28     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:TAIR.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0055070; P:copper ion homeostasis; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6O75400    957   PR40A_HUMAN Pre-mRNA-processing factor 40 hom...483.3     33.5     38     54GO:0016363; C:nuclear matrix; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0032465; P:regulation of cytokinesis; IMP:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7Q9R1C7    953   PR40A_MOUSE Pre-mRNA-processing factor 40 hom...479.6     32     36     53GO:0016363; C:nuclear matrix; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016477; P:cell migration; ISS:UniProtKB.::GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.::GO:0032465; P:regulation of cytokinesis; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
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