Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML103C
Length:
1655
Number of sequences:
5887
Description:
YML103C NUP188 SGDID:S000004571, Chr XIII from 67549-62582, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex and of the nuclear envelope, also involved in nuclear envelope permeability, interacts with Pom152p and Nic96p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P52593    1655   NU188_YEAST Nucleoporin NUP188 OS=Saccharomyc...16550     3306     100     100GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0006609; P:mRNA-binding (hnRNP) protein import into nucleus; TAS:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:SGD.::GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0006611; P:protein export from nucleus; TAS:SGD.::GO:0006610; P:ribosomal protein import into nucleus; TAS:SGD.::GO:0006407; P:rRNA export from nucleus; TAS:SGD.::GO:0006408; P:snRNA export from nucleus; TAS:SGD.::GO:0006608; P:snRNP protein import into nucleus; TAS:SGD.::GO:0006409; P:tRNA export from nucleus; TAS:SGD.
2Q9P7M8    1564   NU184_SCHPO Nucleoporin nup184 OS=Schizosacch...12534e-38     160     22     43GO:0005643; C:nuclear pore; ISS:PomBase.
GO:0006406; P:mRNA export from nucleus; IGI:PomBase.::GO:0006607; P:NLS-bearing substrate import into nucleus; ISS:PomBase.::GO:0006611; P:protein export from nucleus; ISS:PomBase.
3Q5SRE5    1749   NU188_HUMAN Nucleoporin NUP188 homolog OS=Hom...5710.19     40.4     21     39GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
4A2RHR3    365   RLMN_LACLM Ribosomal RNA large subunit methyl...571.3     37     32     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
5Q9QUK0    568   CDKL2_MOUSE Cyclin-dependent kinase-like 2 OS...1051.7     37     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004693; F:cyclin-dependent protein kinase activity; IEA:EC.
6Q032R6    365   RLMN_LACLS Ribosomal RNA large subunit methyl...572     36.6     32     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
7Q9TTK0    566   CDKL2_RABIT Cyclin-dependent kinase-like 2 OS...1063     36.2     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004693; F:cyclin-dependent protein kinase activity; IEA:EC.
8Q057B5    105   RL24_BUCCC 50S ribosomal protein L24 OS=Buchn...803.4     33.5     23     50GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
9Q4R7T5    570   CDKL2_MACFA Cyclin-dependent kinase-like 2 OS...1063.6     35.8     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004693; F:cyclin-dependent protein kinase activity; IEA:EC.
10P29315    456   RINI_RAT Ribonuclease inhibitor OS=Rattus nor...1303.6     35.8     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
11Q5R754    493   CDKL2_PONAB Cyclin-dependent kinase-like 2 OS...1056.1     35     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004693; F:cyclin-dependent protein kinase activity; IEA:EC.
12Q5XIT0    507   CDKL2_RAT Cyclin-dependent kinase-like 2 OS=R...1057.3     34.7     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004693; F:cyclin-dependent protein kinase activity; IEA:EC.
records
Previous ‹‹ ›› Next Total records: 12 1 - 12
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::