Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML095C
Length:
210
Number of sequences:
5887
Description:
YML095C RAD10 SGDID:S000004560, Chr XIII from 82113-81481, Genome Release 64-1-1, reverse complement, Verified ORF, "Single-stranded DNA endonuclease (with Rad1p), cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P06838    210   RAD10_YEAST DNA repair protein RAD10 OS=Sacch...2108e-155     434     100     100GO:0005634; C:nucleus; IDA:SGD.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0000739; F:DNA strand annealing activity; IDA:SGD.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000736; P:double-strand break repair via single-strand annealing, removal of nonhomologous ends; IMP:SGD.::GO:0000710; P:meiotic mismatch repair; IMP:SGD.::GO:0006296; P:nucleotide-excision repair, DNA incision, 5'-to lesion; IDA:SGD.
2Q06182    252   SWI10_SCHPO Mating-type switching protein swi...1192e-17     81.6     36     61GO:0005829; C:cytosol; IDA:PomBase.::GO:0000109; C:nucleotide-excision repair complex; ISS:PomBase.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0031593; F:polyubiquitin binding; IDA:PomBase.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase.
GO:0007534; P:gene conversion at mating-type locus; IMP:PomBase.::GO:0006296; P:nucleotide-excision repair, DNA incision, 5'-to lesion; ISS:PomBase.
3P07992    297   ERCC1_HUMAN DNA excision repair protein ERCC-...1839e-16     77.4     29     51GO:0005737; C:cytoplasm; IDA:HPA.::GO:0000784; C:nuclear chromosome, telomeric region; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000109; C:nucleotide-excision repair complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.
GO:0003684; F:damaged DNA binding; IDA:UniProtKB.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB.
GO:0006312; P:mitotic recombination; IMP:UniProtKB.::GO:0032205; P:negative regulation of telomere maintenance; IMP:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0006295; P:nucleotide-excision repair, DNA incision, 3'-to lesion; IMP:UniProtKB.::GO:0006296; P:nucleotide-excision repair, DNA incision, 5'-to lesion; IMP:UniProtKB.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
4Q1LZ75    294   ERCC1_BOVIN DNA excision repair protein ERCC-...1450.000000000000001     76.6     30     55GO:0000784; C:nuclear chromosome, telomeric region; ISS:UniProtKB.::GO:0000109; C:nucleotide-excision repair complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; ISS:UniProtKB.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; ISS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; ISS:UniProtKB.
GO:0006312; P:mitotic recombination; ISS:UniProtKB.::GO:0032205; P:negative regulation of telomere maintenance; ISS:UniProtKB.::GO:0006295; P:nucleotide-excision repair, DNA incision, 3'-to lesion; ISS:UniProtKB.::GO:0006296; P:nucleotide-excision repair, DNA incision, 5'-to lesion; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.
5P07903    298   ERCC1_MOUSE DNA excision repair protein ERCC-...1400.000000000000002     75.9     29     55GO:0000109; C:nucleotide-excision repair complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; ISS:UniProtKB.
6Q9MA98    410   ERCC1_ARATH DNA excision repair protein ERCC-...1570.000000000005     67.8     27     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0017108; F:5'-flap endonuclease activity; IMP:TAIR.::GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0000724; P:double-strand break repair via homologous recombination; IMP:TAIR.::GO:0010213; P:non-photoreactive DNA repair; IMP:TAIR.::GO:0006294; P:nucleotide-excision repair, preincision complex assembly; IMP:TAIR.::GO:0010332; P:response to gamma radiation; IMP:TAIR.::GO:0010224; P:response to UV-B; IMP:TAIR.
7Q55GG6    514   ERCC1_DICDI DNA excision repair protein ERCC-...944.1     32     26     53GO:0000110; C:nucleotide-excision repair factor 1 complex; ISS:dictyBase.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0000014; F:single-stranded DNA specific endodeoxyribonuclease activity; ISS:dictyBase.
GO:0006289; P:nucleotide-excision repair; ISS:dictyBase.
8P59808    1230   SASH1_MOUSE SAM and SH3 domain-containing pro...909.5     30.8     26     46
records
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