Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML091C
Length:
1202
Number of sequences:
5887
Description:
YML091C RPM2 SGDID:S000004556, Chr XIII from 90731-87123, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein subunit of mitochondrial RNase P, has roles in nuclear transcription, cytoplasmic and mitochondrial RNA processing, and mitochondrial translation; distributed to mitochondria, cytoplasmic processing bodies, and the nucleus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02773    1202   RPM2_YEAST Ribonuclease P protein component, ...12020     2438     100     100GO:0005759; C:mitochondrial matrix; IDA:SGD.::GO:0030678; C:mitochondrial ribonuclease P complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0004526; F:ribonuclease P activity; IEA:EC.
GO:0002181; P:cytoplasmic translation; IMP:SGD.::GO:0007005; P:mitochondrion organization; IMP:SGD.::GO:0006397; P:mRNA processing; IPI:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0001682; P:tRNA 5'-leader removal; IDA:SGD.
2Q9LR67    660   PPR9_ARATH Pentatricopeptide repeat-containin...840.023     42.7     27     46GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
3O04504    606   PPR27_ARATH Pentatricopeptide repeat-containi...2580.054     41.2     23     39
GO:0005488; F:binding; IEA:InterPro.
4Q9M9X9    987   PPR18_ARATH Pentatricopeptide repeat-containi...991.3     37     24     53GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
5A0Q312    357   RF1_CLONN Peptide chain release factor 1 OS=C...374.4     35     43     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016149; F:translation release factor activity, codon specific; IEA:InterPro.
6Q91ZU6    7389   DYST_MOUSE Dystonin OS=Mus musculus (Mouse). ...1005.8     35     25     45GO:0015629; C:actin cytoskeleton; IDA:MGI.::GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005925; C:focal adhesion; IDA:UniProtKB.::GO:0031673; C:H zone; IEA:UniProtKB-SubCell.::GO:0030056; C:hemidesmosome; IDA:MGI.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0014704; C:intercalated disc; IDA:UniProtKB.::GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.::GO:0009898; C:internal side of plasma membrane; IDA:UniProtKB.::GO:0015630; C:microtubule cytoskeleton; IDA:UniProtKB.::GO:0035371; C:microtubule plus end; ISS:UniProtKB.::GO:0060053; C:neurofilament cytoskeleton; IDA:MGI.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0097038; C:perinuclear endoplasmic reticulum; IDA:UniProtKB.::GO:0042383; C:sarcolemma; IEA:UniProtKB-SubCell.::GO:0001725; C:stress fiber; IDA:UniProtKB.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0051010; F:microtubule plus-end binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
GO:0007409; P:axonogenesis; IMP:MGI.::GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0007050; P:cell cycle arrest; IEA:InterPro.::GO:0031122; P:cytoplasmic microtubule organization; IMP:MGI.::GO:0045104; P:intermediate filament cytoskeleton organization; ISS:UniProtKB.::GO:0046907; P:intracellular transport; IDA:UniProtKB.::GO:0031110; P:regulation of microtubule polymerization or depolymerization; IMP:MGI.::GO:0008090; P:retrograde axon cargo transport; IMP:MGI.
7Q9FLJ6    487   PP439_ARATH Pentatricopeptide repeat-containi...786.8     34.3     28     49GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
8Q898Y5    355   RF1_CLOTE Peptide chain release factor 1 OS=C...918.3     33.9     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.::GO:0016149; F:translation release factor activity, codon specific; IEA:InterPro.
GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.
9A6LQG2    360   RF1_CLOB8 Peptide chain release factor 1 OS=a...378.4     33.9     43     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016149; F:translation release factor activity, codon specific; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 9 1 - 9
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::