rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P39682 | 629 | PRP39_YEAST Pre-mRNA-processing factor 39 OS=... | 629 | 0 | 1280 | 100 | 100 | GO:0000243; C:commitment complex; IGI:SGD.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IGI:SGD. | 2 | O74970 | 612 | PRP39_SCHPO Pre-mRNA-processing factor 39 OS=... | 528 | 1e-34 | 142 | 23 | 43 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase. | 3 | Q86UA1 | 669 | PRP39_HUMAN Pre-mRNA-processing factor 39 OS=... | 296 | 1e-20 | 100 | 26 | 43 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | Q1JPZ7 | 752 | PRP39_DANRE Pre-mRNA-processing factor 39 OS=... | 303 | 9e-20 | 97.4 | 26 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 5 | Q4KLU2 | 641 | PRP39_XENLA Pre-mRNA-processing factor 39 OS=... | 292 | 3e-19 | 95.5 | 25 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 6 | Q8K2Z2 | 665 | PRP39_MOUSE Pre-mRNA-processing factor 39 OS=... | 296 | 2e-17 | 89.7 | 26 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 7 | Q7KRW8 | 1066 | PRP39_DROME Pre-mRNA-processing factor 39 OS=... | 122 | 0.000000003 | 63.9 | 30 | 56 | GO:0005685; C:U1 snRNP; ISS:FlyBase. | | | | | | | | | | GO:0031072; F:heat shock protein binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 8 | Q03776 | 544 | PRP42_YEAST U1 small nuclear ribonucleoprotei... | 270 | 0.00000000001 | 71.2 | 24 | 45 | GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD. | 9 | Q9JLI8 | 962 | SART3_MOUSE Squamous cell carcinoma antigen r... | 412 | 0.00001 | 52 | 21 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 10 | O14233 | 733 | RNA14_SCHPO mRNA 3'-end-processing protein rn... | 150 | 0.00002 | 51.6 | 27 | 45 | GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:PomBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase. | 11 | Q15020 | 963 | SART3_HUMAN Squamous cell carcinoma antigen r... | 411 | 0.0007 | 46.6 | 21 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 12 | Q5B3I8 | 1075 | RNA14_EMENI mRNA 3'-end-processing protein rn... | 146 | 0.002 | 45.4 | 25 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 13 | Q12309 | 687 | CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=S... | 143 | 0.003 | 44.3 | 24 | 43 | GO:0000785; C:chromatin; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000354; P:cis assembly of pre-catalytic spliceosome; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD. | 14 | Q9BZJ0 | 848 | CRNL1_HUMAN Crooked neck-like protein 1 OS=Ho... | 248 | 0.012 | 42.4 | 22 | 40 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB. | 15 | Q5BDX1 | 673 | CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=1... | 112 | 6.1 | 33.5 | 22 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 16 | P63155 | 690 | CRNL1_RAT Crooked neck-like protein 1 OS=Ratt... | 248 | 0.068 | 40 | 21 | 40 | | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 17 | P63154 | 690 | CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu... | 248 | 0.068 | 40 | 21 | 40 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 18 | Q5REG1 | 981 | SART3_PONAB Squamous cell carcinoma antigen r... | 429 | 0.21 | 38.5 | 20 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 19 | Q6FW76 | 695 | CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N... | 134 | 0.24 | 38.1 | 25 | 49 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 20 | P87312 | 674 | CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=S... | 74 | 0.26 | 38.1 | 28 | 51 | GO:0005681; C:spliceosomal complex; IDA:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase. | 21 | Q4WT84 | 676 | CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=A... | 112 | 2 | 35 | 23 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 22 | P17886 | 702 | CRN_DROME Protein crooked neck OS=Drosophila ... | 158 | 0.56 | 37 | 23 | 42 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005813; C:centrosome; IDA:FlyBase.::GO:0072686; C:mitotic spindle; IDA:FlyBase.::GO:0016607; C:nuclear speck; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0008366; P:axon ensheathment; IMP:FlyBase.::GO:0051298; P:centrosome duplication; IMP:FlyBase.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0007443; P:Malpighian tubule morphogenesis; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0007438; P:oenocyte development; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 23 | Q9CJY8 | 203 | HFLD_PASMU High frequency lysogenization prot... | 79 | 0.67 | 35.8 | 29 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 24 | Q9USY2 | 1014 | YOW4_SCHPO Uncharacterized RNA-binding protei... | 141 | 1.3 | 35.8 | 20 | 46 | GO:0005688; C:U6 snRNP; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; ISS:PomBase. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; ISS:PomBase.::GO:0000245; P:spliceosomal complex assembly; ISS:PomBase. | 25 | B0VLZ5 | 1397 | RPOC_ACIBS DNA-directed RNA polymerase subuni... | 110 | 2.1 | 35.4 | 26 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 26 | B0VDH9 | 1397 | RPOC_ACIBY DNA-directed RNA polymerase subuni... | 110 | 2.1 | 35.4 | 26 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 27 | A3M1G4 | 1397 | RPOC_ACIBT DNA-directed RNA polymerase subuni... | 110 | 2.1 | 35.4 | 26 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 28 | B2I1Z2 | 1397 | RPOC_ACIBC DNA-directed RNA polymerase subuni... | 110 | 2.1 | 35.4 | 26 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 29 | B0URI2 | 203 | HFLD_HAES2 High frequency lysogenization prot... | 80 | 2.1 | 34.3 | 28 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 30 | Q0I588 | 203 | HFLD_HAES1 High frequency lysogenization prot... | 80 | 2.1 | 34.3 | 28 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 31 | P59623 | 141 | SP2AB_CLOTE Anti-sigma F factor OS=Clostridiu... | 117 | 2.6 | 33.5 | 21 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:InterPro.::GO:0016989; F:sigma factor antagonist activity; IEA:InterPro. | | | | | | | | | | GO:0045892; P:negative regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW. |