Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YML045W
Length:
440
Number of sequences:
5887
Description:
YML045W-A YML045W-A SGDID:S000007381, Chr XIII from 184461-185783, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P0C2J2    438   YG21A_YEAST Transposon Ty2-GR1 Gag polyprotei...4354e-126     408     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
92P0C2J7    1802   YH41B_YEAST Transposon Ty4-H Gag-Pol polyprot...2957e-32     140     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
93P47024    1803   YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprot...2951e-31     139     31     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
94P10978    1328   POLX_TOBAC Retrovirus-related Pol polyprotein...4032e-19     99.8     23     42
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
95P04146    1409   COPIA_DROME Copia protein OS=Drosophila melan...3820.00000000007     71.6     23     43
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
96P25600    308   YCH4_YEAST Putative transposon Ty5-1 protein ...3280.00006     50.8     23     43
97Q87040    1146   POL_SFVCP Pro-Pol polyprotein OS=Simian foamy...2050.00008     51.6     26     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
98P14350    1143   POL_FOAMV Pro-Pol polyprotein OS=Human spumar...2050.0008     48.1     25     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
99P0AAV4    218   YBGJ_ECOLI Uncharacterized protein ybgJ OS=Es...890.02     42     33     43
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
100P0AAV5    218   YBGJ_ECO57 Uncharacterized protein ybgJ OS=Es...890.02     42     33     43
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
101P0A3L4    195   Y4601_AGRT7 Insertion element IS136 uncharact...850.077     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
102P0A3L3    195   Y4601_AGRT5 Insertion element IS136 uncharact...850.077     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
103Q6P6R0    348   LFG1_RAT Protein lifeguard 1 OS=Rattus norveg...1291.1     37.4     32     36GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005261; F:cation channel activity; NAS:RGD.
104P50555    461   TNR1A_PIG Tumor necrosis factor receptor supe...661.7     37     30     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.::GO:0005031; F:tumor necrosis factor-activated receptor activity; ISS:UniProtKB.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006954; P:inflammatory response; ISS:UniProtKB.::GO:0050729; P:positive regulation of inflammatory response; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006693; P:prostaglandin metabolic process; IEA:InterPro.
105Q9Y7Q9    583   YCX2_SCHPO Probable metabolite transporter C2...832.2     36.6     33     45GO:0005783; C:endoplasmic reticulum; IDA:PomBase.::GO:0005794; C:Golgi apparatus; IDA:PomBase.::GO:0005887; C:integral to plasma membrane; ISS:PomBase.
GO:0005315; F:inorganic phosphate transmembrane transporter activity; ISS:PomBase.
106Q6ZNG9    492   KRBA2_HUMAN KRAB-A domain-containing protein ...1296.1     35     23     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
107Q9ESF4    345   LFG1_MOUSE Protein lifeguard 1 OS=Mus musculu...1369.7     34.3     32     37GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
records
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